Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13n-4A0A0G2JG01 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC13.74□□□□□ -0.21
Trav13n-4A0A0G2JG01 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13n-4A0A0G2JG01 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13n-4A0A0G2JG01 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13n-4A0A0G2JG01 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13n-4A0A0G2JG01 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13n-4A0A0G2JG01 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13n-4A0A0G2JG01 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC13.74□□□□□ -0.21
Trav13n-4A0A0G2JG01 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC13.74□□□□□ -0.21
Trav13n-4A0A0G2JG01 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13n-4A0A0G2JG01 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC13.74□□□□□ -0.21
Trav13n-4A0A0G2JG01 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC13.74□□□□□ -0.21
Trav13n-4A0A0G2JG01 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC13.74□□□□□ -0.21
Trav13n-4A0A0G2JG01 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13n-4A0A0G2JG01 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13n-4A0A0G2JG01 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13n-4A0A0G2JG01 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13n-4A0A0G2JG01 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13n-4A0A0G2JG01 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13n-4A0A0G2JG01 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13n-4A0A0G2JG01 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC13.74□□□□□ -0.21
Trav13n-4A0A0G2JG01 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Trav13n-4A0A0G2JG01 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13n-4A0A0G2JG01 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Trav13n-4A0A0G2JG01 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13n-4A0A0G2JG01 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13n-4A0A0G2JG01 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13n-4A0A0G2JG01 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13n-4A0A0G2JG01 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13n-4A0A0G2JG01 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13n-4A0A0G2JG01 Timm23-208ENSMUST00000226683 750 ntBASIC13.73□□□□□ -0.21
Trav13n-4A0A0G2JG01 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Trav13n-4A0A0G2JG01 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Trav13n-4A0A0G2JG01 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13n-4A0A0G2JG01 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC13.73□□□□□ -0.21
Trav13n-4A0A0G2JG01 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13n-4A0A0G2JG01 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13n-4A0A0G2JG01 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13n-4A0A0G2JG01 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13n-4A0A0G2JG01 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trav13n-4A0A0G2JG01 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13n-4A0A0G2JG01 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13n-4A0A0G2JG01 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Trav13n-4A0A0G2JG01 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13n-4A0A0G2JG01 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13n-4A0A0G2JG01 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13n-4A0A0G2JG01 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13n-4A0A0G2JG01 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13n-4A0A0G2JG01 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13n-4A0A0G2JG01 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC13.72□□□□□ -0.21
Trav13n-4A0A0G2JG01 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Trav13n-4A0A0G2JG01 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13n-4A0A0G2JG01 AC125311.2-201ENSMUST00000227477 1940 ntBASIC13.72□□□□□ -0.21
Trav13n-4A0A0G2JG01 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13n-4A0A0G2JG01 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13n-4A0A0G2JG01 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13n-4A0A0G2JG01 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13n-4A0A0G2JG01 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13n-4A0A0G2JG01 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13n-4A0A0G2JG01 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC13.72□□□□□ -0.21
Trav13n-4A0A0G2JG01 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13n-4A0A0G2JG01 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13n-4A0A0G2JG01 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trav13n-4A0A0G2JG01 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13n-4A0A0G2JG01 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13n-4A0A0G2JG01 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC13.72□□□□□ -0.21
Trav13n-4A0A0G2JG01 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13n-4A0A0G2JG01 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC13.72□□□□□ -0.21
Trav13n-4A0A0G2JG01 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC13.72□□□□□ -0.21
Trav13n-4A0A0G2JG01 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC13.72□□□□□ -0.21
Trav13n-4A0A0G2JG01 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13n-4A0A0G2JG01 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13n-4A0A0G2JG01 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13n-4A0A0G2JG01 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13n-4A0A0G2JG01 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC13.72□□□□□ -0.21
Trav13n-4A0A0G2JG01 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13n-4A0A0G2JG01 Gm8668-201ENSMUST00000120559 1447 ntBASIC13.72□□□□□ -0.21
Trav13n-4A0A0G2JG01 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13n-4A0A0G2JG01 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13n-4A0A0G2JG01 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13n-4A0A0G2JG01 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13n-4A0A0G2JG01 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav13n-4A0A0G2JG01 Hivep3-201ENSMUST00000084306 2973 ntBASIC13.71□□□□□ -0.21
Trav13n-4A0A0G2JG01 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav13n-4A0A0G2JG01 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC13.71□□□□□ -0.21
Trav13n-4A0A0G2JG01 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav13n-4A0A0G2JG01 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav13n-4A0A0G2JG01 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Trav13n-4A0A0G2JG01 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Trav13n-4A0A0G2JG01 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav13n-4A0A0G2JG01 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav13n-4A0A0G2JG01 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Trav13n-4A0A0G2JG01 Gm37292-201ENSMUST00000192062 758 ntBASIC13.71□□□□□ -0.21
Trav13n-4A0A0G2JG01 Gm38285-201ENSMUST00000192928 922 ntBASIC13.71□□□□□ -0.21
Trav13n-4A0A0G2JG01 Gm21814-202ENSMUST00000203277 873 ntBASIC13.71□□□□□ -0.21
Trav13n-4A0A0G2JG01 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav13n-4A0A0G2JG01 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav13n-4A0A0G2JG01 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav13n-4A0A0G2JG01 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms