Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13d-4A0A0G2JFX3 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Gm45412-201ENSMUST00000210217 2275 ntBASIC11.68□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Cxcl14-202ENSMUST00000224801 1467 ntBASIC11.68□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trav13d-4A0A0G2JFX3 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC11.67□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Gm26596-201ENSMUST00000180464 2655 ntBASIC11.67□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trav13d-4A0A0G2JFX3 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC11.67□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Gm13148-201ENSMUST00000118892 745 ntBASIC11.67□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC11.67□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Gm18284-201ENSMUST00000172604 624 ntBASIC11.67□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Mir5133-201ENSMUST00000174955 77 ntBASIC11.67□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC11.67□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Gm44672-201ENSMUST00000206944 1098 ntBASIC11.67□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC11.67□□□□□ -0.54
Trav13d-4A0A0G2JFX3 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Rab3c-203ENSMUST00000224180 967 ntBASIC11.67□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13d-4A0A0G2JFX3 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC11.67□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13d-4A0A0G2JFX3 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms