Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC12.27□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav13n-1A0A0G2JEU8 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC12.27□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav13n-1A0A0G2JEU8 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC12.27□□□□□ -0.45
Trav13n-1A0A0G2JEU8 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC12.27□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav13n-1A0A0G2JEU8 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC12.27□□□□□ -0.45
Trav13n-1A0A0G2JEU8 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Gm18959-201ENSMUST00000208954 655 ntBASIC12.27□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC12.27□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav13n-1A0A0G2JEU8 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav13n-1A0A0G2JEU8 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC12.27□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC12.27□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Gm45244-201ENSMUST00000211328 2200 ntBASIC12.26□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13n-1A0A0G2JEU8 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC12.26□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC12.26□□□□□ -0.45
Trav13n-1A0A0G2JEU8 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC12.26□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC12.26□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Gm24841-201ENSMUST00000158676 357 ntBASIC12.26□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trav13n-1A0A0G2JEU8 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC12.26□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Gm43338-201ENSMUST00000198617 2223 ntBASIC12.26□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13n-1A0A0G2JEU8 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC12.25□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC12.25□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Gm2274-201ENSMUST00000184539 609 ntBASIC12.25□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Gm43353-201ENSMUST00000199224 1295 ntBASIC12.25□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Trav13n-1A0A0G2JEU8 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 216.5 ms