Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC12.32□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Gm7712-202ENSMUST00000222331 1510 ntBASIC12.32□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Gm22240-201ENSMUST00000175225 82 ntBASIC12.31□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9n-2A0A0G2JDP3 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav9n-2A0A0G2JDP3 AC154649.1-201ENSMUST00000227392 384 ntBASIC12.31□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Gm10812-201ENSMUST00000099864 546 ntBASIC12.31□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC12.31□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9n-2A0A0G2JDP3 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC12.3□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC12.3□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC12.3□□□□□ -0.44
Trav9n-2A0A0G2JDP3 AC153881.1-201ENSMUST00000214448 284 ntBASIC12.3□□□□□ -0.44
Trav9n-2A0A0G2JDP3 AC112142.1-201ENSMUST00000228796 918 ntBASIC12.3□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9n-2A0A0G2JDP3 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC12.3□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC12.3□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9n-2A0A0G2JDP3 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9n-2A0A0G2JDP3 AC175538.1-201ENSMUST00000225343 1269 ntBASIC12.29□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9n-2A0A0G2JDP3 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC12.28□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC12.28□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC12.28□□□□□ -0.44
Trav9n-2A0A0G2JDP3 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC12.28□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Gm37025-201ENSMUST00000195159 829 ntBASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms