Protein–RNA interactions for Protein: A0A0B4J1P8

Trbv13-1, T cell receptor beta, variable 13-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-1A0A0B4J1P8 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC12.62□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv13-1A0A0B4J1P8 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv13-1A0A0B4J1P8 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Otx2os1-204ENSMUST00000227221 751 ntBASIC12.62□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Gm45774-201ENSMUST00000211992 2665 ntBASIC12.62□□□□□ -0.39
Trbv13-1A0A0B4J1P8 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC12.62□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC12.61□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC12.61□□□□□ -0.39
Trbv13-1A0A0B4J1P8 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC12.61□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Gm11643-201ENSMUST00000119578 864 ntBASIC12.61□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC12.61□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Gm3375-201ENSMUST00000203929 796 ntBASIC12.61□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC12.61□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Gm45412-201ENSMUST00000210217 2275 ntBASIC12.61□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC12.61□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Gm6433-201ENSMUST00000118634 875 ntBASIC12.6□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Trbv13-1A0A0B4J1P8 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv13-1A0A0B4J1P8 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC12.6□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms