Protein–RNA interactions for Protein: A0A0B4J1N1

C920008G01Rik, RIKEN cDNA C920008G01 gene (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C920008G01RikA0A0B4J1N1 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
C920008G01RikA0A0B4J1N1 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Gm11620-201ENSMUST00000118770 1845 ntBASIC11.74□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Gm19430-201ENSMUST00000193847 2137 ntBASIC11.74□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC11.73□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC11.73□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Gm11421-201ENSMUST00000122124 294 ntBASIC11.73□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC11.73□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Gm43034-201ENSMUST00000198678 1364 ntBASIC11.73□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
C920008G01RikA0A0B4J1N1 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC11.73□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC11.73□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC11.72□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
C920008G01RikA0A0B4J1N1 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC11.72□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC11.71□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms