Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbc1A0A0A6YWV4 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trbc1A0A0A6YWV4 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbc1A0A0A6YWV4 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbc1A0A0A6YWV4 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbc1A0A0A6YWV4 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbc1A0A0A6YWV4 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC15.54■□□□□ 0.08
Trbc1A0A0A6YWV4 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbc1A0A0A6YWV4 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC15.54■□□□□ 0.08
Trbc1A0A0A6YWV4 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trbc1A0A0A6YWV4 Il3ra-202ENSMUST00000223589 738 ntBASIC15.54■□□□□ 0.08
Trbc1A0A0A6YWV4 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbc1A0A0A6YWV4 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbc1A0A0A6YWV4 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbc1A0A0A6YWV4 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbc1A0A0A6YWV4 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbc1A0A0A6YWV4 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.54■□□□□ 0.08
Trbc1A0A0A6YWV4 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trbc1A0A0A6YWV4 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC15.54■□□□□ 0.08
Trbc1A0A0A6YWV4 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trbc1A0A0A6YWV4 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbc1A0A0A6YWV4 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbc1A0A0A6YWV4 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trbc1A0A0A6YWV4 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbc1A0A0A6YWV4 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trbc1A0A0A6YWV4 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trbc1A0A0A6YWV4 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Trbc1A0A0A6YWV4 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC15.53■□□□□ 0.08
Trbc1A0A0A6YWV4 Gm7791-201ENSMUST00000219066 539 ntBASIC15.53■□□□□ 0.08
Trbc1A0A0A6YWV4 AC159205.6-201ENSMUST00000224935 887 ntBASIC15.53■□□□□ 0.08
Trbc1A0A0A6YWV4 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Trbc1A0A0A6YWV4 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trbc1A0A0A6YWV4 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbc1A0A0A6YWV4 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbc1A0A0A6YWV4 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbc1A0A0A6YWV4 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbc1A0A0A6YWV4 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbc1A0A0A6YWV4 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbc1A0A0A6YWV4 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbc1A0A0A6YWV4 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trbc1A0A0A6YWV4 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbc1A0A0A6YWV4 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trbc1A0A0A6YWV4 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Trbc1A0A0A6YWV4 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.52■□□□□ 0.08
Trbc1A0A0A6YWV4 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trbc1A0A0A6YWV4 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC15.52■□□□□ 0.08
Trbc1A0A0A6YWV4 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trbc1A0A0A6YWV4 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trbc1A0A0A6YWV4 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trbc1A0A0A6YWV4 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trbc1A0A0A6YWV4 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC15.52■□□□□ 0.08
Trbc1A0A0A6YWV4 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trbc1A0A0A6YWV4 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trbc1A0A0A6YWV4 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trbc1A0A0A6YWV4 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Trbc1A0A0A6YWV4 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trbc1A0A0A6YWV4 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trbc1A0A0A6YWV4 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trbc1A0A0A6YWV4 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trbc1A0A0A6YWV4 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trbc1A0A0A6YWV4 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trbc1A0A0A6YWV4 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.52■□□□□ 0.07
Trbc1A0A0A6YWV4 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC15.52■□□□□ 0.07
Trbc1A0A0A6YWV4 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trbc1A0A0A6YWV4 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC15.52■□□□□ 0.07
Trbc1A0A0A6YWV4 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbc1A0A0A6YWV4 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbc1A0A0A6YWV4 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbc1A0A0A6YWV4 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbc1A0A0A6YWV4 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbc1A0A0A6YWV4 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbc1A0A0A6YWV4 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbc1A0A0A6YWV4 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Trbc1A0A0A6YWV4 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbc1A0A0A6YWV4 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC15.51■□□□□ 0.07
Trbc1A0A0A6YWV4 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbc1A0A0A6YWV4 Gm2274-201ENSMUST00000184539 609 ntBASIC15.51■□□□□ 0.07
Trbc1A0A0A6YWV4 Gm7889-201ENSMUST00000185591 958 ntBASIC15.51■□□□□ 0.07
Trbc1A0A0A6YWV4 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Trbc1A0A0A6YWV4 AC120002.2-201ENSMUST00000220205 773 ntBASIC15.51■□□□□ 0.07
Trbc1A0A0A6YWV4 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbc1A0A0A6YWV4 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbc1A0A0A6YWV4 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbc1A0A0A6YWV4 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Trbc1A0A0A6YWV4 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC15.51■□□□□ 0.07
Trbc1A0A0A6YWV4 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbc1A0A0A6YWV4 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbc1A0A0A6YWV4 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbc1A0A0A6YWV4 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbc1A0A0A6YWV4 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Trbc1A0A0A6YWV4 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbc1A0A0A6YWV4 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbc1A0A0A6YWV4 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.51■□□□□ 0.07
Trbc1A0A0A6YWV4 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trbc1A0A0A6YWV4 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbc1A0A0A6YWV4 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbc1A0A0A6YWV4 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbc1A0A0A6YWV4 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbc1A0A0A6YWV4 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbc1A0A0A6YWV4 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms