Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trav6n-6A0A075B6B2 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC12.63□□□□□ -0.39
Trav6n-6A0A075B6B2 Gm29257-201ENSMUST00000186115 639 ntBASIC12.63□□□□□ -0.39
Trav6n-6A0A075B6B2 Gm44549-201ENSMUST00000208351 577 ntBASIC12.63□□□□□ -0.39
Trav6n-6A0A075B6B2 Gm4968-201ENSMUST00000071458 858 ntBASIC12.63□□□□□ -0.39
Trav6n-6A0A075B6B2 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav6n-6A0A075B6B2 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6n-6A0A075B6B2 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6n-6A0A075B6B2 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC12.63□□□□□ -0.39
Trav6n-6A0A075B6B2 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6n-6A0A075B6B2 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6n-6A0A075B6B2 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6n-6A0A075B6B2 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6n-6A0A075B6B2 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6n-6A0A075B6B2 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6n-6A0A075B6B2 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6n-6A0A075B6B2 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6n-6A0A075B6B2 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trav6n-6A0A075B6B2 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6n-6A0A075B6B2 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6n-6A0A075B6B2 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6n-6A0A075B6B2 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6n-6A0A075B6B2 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6n-6A0A075B6B2 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6n-6A0A075B6B2 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6n-6A0A075B6B2 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6n-6A0A075B6B2 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6n-6A0A075B6B2 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trav6n-6A0A075B6B2 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6n-6A0A075B6B2 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6n-6A0A075B6B2 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav6n-6A0A075B6B2 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6n-6A0A075B6B2 Gm44672-201ENSMUST00000206944 1098 ntBASIC12.62□□□□□ -0.39
Trav6n-6A0A075B6B2 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trav6n-6A0A075B6B2 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6n-6A0A075B6B2 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6n-6A0A075B6B2 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6n-6A0A075B6B2 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6n-6A0A075B6B2 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6n-6A0A075B6B2 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6n-6A0A075B6B2 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6n-6A0A075B6B2 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Trav6n-6A0A075B6B2 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6n-6A0A075B6B2 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6n-6A0A075B6B2 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6n-6A0A075B6B2 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6n-6A0A075B6B2 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6n-6A0A075B6B2 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6n-6A0A075B6B2 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6n-6A0A075B6B2 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6n-6A0A075B6B2 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6n-6A0A075B6B2 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6n-6A0A075B6B2 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6n-6A0A075B6B2 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6n-6A0A075B6B2 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6n-6A0A075B6B2 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6n-6A0A075B6B2 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Trav6n-6A0A075B6B2 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC12.61□□□□□ -0.39
Trav6n-6A0A075B6B2 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6n-6A0A075B6B2 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC12.61□□□□□ -0.39
Trav6n-6A0A075B6B2 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6n-6A0A075B6B2 Gm2559-201ENSMUST00000201323 363 ntBASIC12.61□□□□□ -0.39
Trav6n-6A0A075B6B2 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC12.61□□□□□ -0.39
Trav6n-6A0A075B6B2 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Trav6n-6A0A075B6B2 AC107452.1-201ENSMUST00000227963 481 ntBASIC12.61□□□□□ -0.39
Trav6n-6A0A075B6B2 Spcs1-207ENSMUST00000228767 1008 ntBASIC12.61□□□□□ -0.39
Trav6n-6A0A075B6B2 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6n-6A0A075B6B2 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6n-6A0A075B6B2 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC12.61□□□□□ -0.39
Trav6n-6A0A075B6B2 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6n-6A0A075B6B2 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trav6n-6A0A075B6B2 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav6n-6A0A075B6B2 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trav6n-6A0A075B6B2 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6n-6A0A075B6B2 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trav6n-6A0A075B6B2 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6n-6A0A075B6B2 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6n-6A0A075B6B2 Gm11841-201ENSMUST00000117060 1963 ntBASIC12.61□□□□□ -0.39
Trav6n-6A0A075B6B2 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6n-6A0A075B6B2 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6n-6A0A075B6B2 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC12.61□□□□□ -0.39
Trav6n-6A0A075B6B2 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6n-6A0A075B6B2 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6n-6A0A075B6B2 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trav6n-6A0A075B6B2 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6n-6A0A075B6B2 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6n-6A0A075B6B2 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
Trav6n-6A0A075B6B2 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6n-6A0A075B6B2 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trav6n-6A0A075B6B2 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav6n-6A0A075B6B2 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6n-6A0A075B6B2 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6n-6A0A075B6B2 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6n-6A0A075B6B2 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6n-6A0A075B6B2 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6n-6A0A075B6B2 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6n-6A0A075B6B2 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trav6n-6A0A075B6B2 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav6n-6A0A075B6B2 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6n-6A0A075B6B2 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms