Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav3-4A0A075B654 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Trav3-4A0A075B654 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav3-4A0A075B654 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trav3-4A0A075B654 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav3-4A0A075B654 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav3-4A0A075B654 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trav3-4A0A075B654 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3-4A0A075B654 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3-4A0A075B654 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trav3-4A0A075B654 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3-4A0A075B654 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3-4A0A075B654 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3-4A0A075B654 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC11.45□□□□□ -0.58
Trav3-4A0A075B654 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3-4A0A075B654 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3-4A0A075B654 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trav3-4A0A075B654 Gm7417-201ENSMUST00000192950 473 ntBASIC11.45□□□□□ -0.58
Trav3-4A0A075B654 Gm19094-201ENSMUST00000209791 1246 ntBASIC11.45□□□□□ -0.58
Trav3-4A0A075B654 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3-4A0A075B654 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav3-4A0A075B654 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3-4A0A075B654 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3-4A0A075B654 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3-4A0A075B654 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3-4A0A075B654 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3-4A0A075B654 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Trav3-4A0A075B654 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trav3-4A0A075B654 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3-4A0A075B654 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3-4A0A075B654 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3-4A0A075B654 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3-4A0A075B654 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3-4A0A075B654 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Trav3-4A0A075B654 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Trav3-4A0A075B654 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3-4A0A075B654 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3-4A0A075B654 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC11.44□□□□□ -0.58
Trav3-4A0A075B654 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3-4A0A075B654 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3-4A0A075B654 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3-4A0A075B654 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Trav3-4A0A075B654 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3-4A0A075B654 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3-4A0A075B654 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC11.44□□□□□ -0.58
Trav3-4A0A075B654 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3-4A0A075B654 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3-4A0A075B654 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC11.44□□□□□ -0.58
Trav3-4A0A075B654 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3-4A0A075B654 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3-4A0A075B654 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3-4A0A075B654 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Trav3-4A0A075B654 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trav3-4A0A075B654 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3-4A0A075B654 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3-4A0A075B654 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3-4A0A075B654 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3-4A0A075B654 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3-4A0A075B654 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trav3-4A0A075B654 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3-4A0A075B654 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC11.44□□□□□ -0.58
Trav3-4A0A075B654 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3-4A0A075B654 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3-4A0A075B654 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3-4A0A075B654 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3-4A0A075B654 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC11.43□□□□□ -0.58
Trav3-4A0A075B654 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
Trav3-4A0A075B654 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
Trav3-4A0A075B654 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Trav3-4A0A075B654 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3-4A0A075B654 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3-4A0A075B654 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3-4A0A075B654 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3-4A0A075B654 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC11.43□□□□□ -0.58
Trav3-4A0A075B654 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3-4A0A075B654 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3-4A0A075B654 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC11.43□□□□□ -0.58
Trav3-4A0A075B654 CT025610.1-201ENSMUST00000224552 1786 ntBASIC11.43□□□□□ -0.58
Trav3-4A0A075B654 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3-4A0A075B654 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3-4A0A075B654 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Trav3-4A0A075B654 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3-4A0A075B654 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3-4A0A075B654 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3-4A0A075B654 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3-4A0A075B654 Gm8309-201ENSMUST00000206627 1448 ntBASIC11.43□□□□□ -0.58
Trav3-4A0A075B654 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3-4A0A075B654 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3-4A0A075B654 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3-4A0A075B654 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3-4A0A075B654 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav3-4A0A075B654 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Trav3-4A0A075B654 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav3-4A0A075B654 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav3-4A0A075B654 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav3-4A0A075B654 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav3-4A0A075B654 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC11.42□□□□□ -0.58
Trav3-4A0A075B654 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav3-4A0A075B654 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav3-4A0A075B654 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms