Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Gm6576-201ENSMUST00000169678 883 ntBASIC13.87□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC13.87□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Rab3c-203ENSMUST00000224180 967 ntBASIC13.87□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC13.86□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC13.86□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC13.85□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC13.85□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Gm13148-201ENSMUST00000118892 745 ntBASIC13.85□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC13.85□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 AC069562.2-201ENSMUST00000224644 2146 ntBASIC13.85□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC13.84□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Gm10138-203ENSMUST00000206952 366 ntBASIC13.84□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.84□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav15-2-dv6-2A0A075B650 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav15-2-dv6-2A0A075B650 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms