Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12-3A0A075B648 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trav12-3A0A075B648 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trav12-3A0A075B648 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12-3A0A075B648 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trav12-3A0A075B648 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12-3A0A075B648 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12-3A0A075B648 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12-3A0A075B648 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12-3A0A075B648 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12-3A0A075B648 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12-3A0A075B648 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12-3A0A075B648 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav12-3A0A075B648 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12-3A0A075B648 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trav12-3A0A075B648 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12-3A0A075B648 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12-3A0A075B648 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12-3A0A075B648 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12-3A0A075B648 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trav12-3A0A075B648 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12-3A0A075B648 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12-3A0A075B648 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12-3A0A075B648 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12-3A0A075B648 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12-3A0A075B648 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC12.37□□□□□ -0.43
Trav12-3A0A075B648 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12-3A0A075B648 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12-3A0A075B648 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12-3A0A075B648 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12-3A0A075B648 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12-3A0A075B648 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Trav12-3A0A075B648 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12-3A0A075B648 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12-3A0A075B648 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12-3A0A075B648 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12-3A0A075B648 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12-3A0A075B648 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12-3A0A075B648 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC12.37□□□□□ -0.43
Trav12-3A0A075B648 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav12-3A0A075B648 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC12.37□□□□□ -0.43
Trav12-3A0A075B648 Gm22325-201ENSMUST00000158904 308 ntBASIC12.37□□□□□ -0.43
Trav12-3A0A075B648 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12-3A0A075B648 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC12.37□□□□□ -0.43
Trav12-3A0A075B648 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav12-3A0A075B648 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12-3A0A075B648 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12-3A0A075B648 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12-3A0A075B648 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12-3A0A075B648 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12-3A0A075B648 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12-3A0A075B648 Ccdc166-201ENSMUST00000182172 2584 ntBASIC12.37□□□□□ -0.43
Trav12-3A0A075B648 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12-3A0A075B648 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12-3A0A075B648 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12-3A0A075B648 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12-3A0A075B648 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Trav12-3A0A075B648 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12-3A0A075B648 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav12-3A0A075B648 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Trav12-3A0A075B648 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trav12-3A0A075B648 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12-3A0A075B648 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12-3A0A075B648 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12-3A0A075B648 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12-3A0A075B648 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12-3A0A075B648 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav12-3A0A075B648 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12-3A0A075B648 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12-3A0A075B648 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12-3A0A075B648 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12-3A0A075B648 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12-3A0A075B648 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trav12-3A0A075B648 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC12.36□□□□□ -0.43
Trav12-3A0A075B648 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC12.36□□□□□ -0.43
Trav12-3A0A075B648 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC12.36□□□□□ -0.43
Trav12-3A0A075B648 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12-3A0A075B648 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12-3A0A075B648 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav12-3A0A075B648 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12-3A0A075B648 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12-3A0A075B648 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12-3A0A075B648 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trav12-3A0A075B648 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12-3A0A075B648 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12-3A0A075B648 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12-3A0A075B648 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12-3A0A075B648 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12-3A0A075B648 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12-3A0A075B648 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav12-3A0A075B648 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12-3A0A075B648 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12-3A0A075B648 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12-3A0A075B648 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12-3A0A075B648 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12-3A0A075B648 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12-3A0A075B648 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12-3A0A075B648 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav12-3A0A075B648 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12-3A0A075B648 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms