Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6-7-dv9A0A075B639 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6-7-dv9A0A075B639 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.99□□□□□ -0.01
Trav6-7-dv9A0A075B639 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6-7-dv9A0A075B639 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6-7-dv9A0A075B639 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6-7-dv9A0A075B639 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6-7-dv9A0A075B639 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6-7-dv9A0A075B639 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC14.99□□□□□ -0.01
Trav6-7-dv9A0A075B639 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6-7-dv9A0A075B639 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6-7-dv9A0A075B639 Haglr-201ENSMUST00000100000 2085 ntBASIC14.99□□□□□ -0.01
Trav6-7-dv9A0A075B639 Gm8839-201ENSMUST00000121279 1645 ntBASIC14.99□□□□□ -0.01
Trav6-7-dv9A0A075B639 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-7-dv9A0A075B639 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-7-dv9A0A075B639 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-7-dv9A0A075B639 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-7-dv9A0A075B639 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-7-dv9A0A075B639 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-7-dv9A0A075B639 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-7-dv9A0A075B639 Gm13181-201ENSMUST00000120117 1069 ntBASIC14.98□□□□□ -0.01
Trav6-7-dv9A0A075B639 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Trav6-7-dv9A0A075B639 AC156016.1-201ENSMUST00000227190 1035 ntBASIC14.98□□□□□ -0.01
Trav6-7-dv9A0A075B639 Odf3b-204ENSMUST00000227834 930 ntBASIC14.98□□□□□ -0.01
Trav6-7-dv9A0A075B639 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-7-dv9A0A075B639 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-7-dv9A0A075B639 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-7-dv9A0A075B639 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Trav6-7-dv9A0A075B639 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-7-dv9A0A075B639 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-7-dv9A0A075B639 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-7-dv9A0A075B639 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-7-dv9A0A075B639 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Trav6-7-dv9A0A075B639 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-7-dv9A0A075B639 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-7-dv9A0A075B639 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-7-dv9A0A075B639 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-7-dv9A0A075B639 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-7-dv9A0A075B639 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-7-dv9A0A075B639 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-7-dv9A0A075B639 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.97□□□□□ -0.01
Trav6-7-dv9A0A075B639 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-7-dv9A0A075B639 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-7-dv9A0A075B639 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-7-dv9A0A075B639 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-7-dv9A0A075B639 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-7-dv9A0A075B639 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC14.97□□□□□ -0.01
Trav6-7-dv9A0A075B639 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC14.97□□□□□ -0.01
Trav6-7-dv9A0A075B639 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC14.97□□□□□ -0.01
Trav6-7-dv9A0A075B639 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Trav6-7-dv9A0A075B639 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Trav6-7-dv9A0A075B639 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-7-dv9A0A075B639 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-7-dv9A0A075B639 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-7-dv9A0A075B639 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-7-dv9A0A075B639 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-7-dv9A0A075B639 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC14.97□□□□□ -0.01
Trav6-7-dv9A0A075B639 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-7-dv9A0A075B639 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-7-dv9A0A075B639 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-7-dv9A0A075B639 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-7-dv9A0A075B639 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-7-dv9A0A075B639 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Trav6-7-dv9A0A075B639 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6-7-dv9A0A075B639 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6-7-dv9A0A075B639 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Trav6-7-dv9A0A075B639 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6-7-dv9A0A075B639 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6-7-dv9A0A075B639 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6-7-dv9A0A075B639 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6-7-dv9A0A075B639 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6-7-dv9A0A075B639 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6-7-dv9A0A075B639 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6-7-dv9A0A075B639 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6-7-dv9A0A075B639 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6-7-dv9A0A075B639 Gm18958-201ENSMUST00000174258 762 ntBASIC14.96□□□□□ -0.01
Trav6-7-dv9A0A075B639 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6-7-dv9A0A075B639 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC14.96□□□□□ -0.01
Trav6-7-dv9A0A075B639 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6-7-dv9A0A075B639 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6-7-dv9A0A075B639 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6-7-dv9A0A075B639 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC14.96□□□□□ -0.02
Trav6-7-dv9A0A075B639 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-7-dv9A0A075B639 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-7-dv9A0A075B639 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-7-dv9A0A075B639 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-7-dv9A0A075B639 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-7-dv9A0A075B639 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC14.95□□□□□ -0.02
Trav6-7-dv9A0A075B639 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC14.95□□□□□ -0.02
Trav6-7-dv9A0A075B639 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-7-dv9A0A075B639 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14.95□□□□□ -0.02
Trav6-7-dv9A0A075B639 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-7-dv9A0A075B639 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-7-dv9A0A075B639 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Trav6-7-dv9A0A075B639 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-7-dv9A0A075B639 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC14.95□□□□□ -0.02
Trav6-7-dv9A0A075B639 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-7-dv9A0A075B639 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-7-dv9A0A075B639 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-7-dv9A0A075B639 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms