Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav16nA0A075B634 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav16nA0A075B634 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav16nA0A075B634 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav16nA0A075B634 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav16nA0A075B634 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav16nA0A075B634 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav16nA0A075B634 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav16nA0A075B634 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav16nA0A075B634 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav16nA0A075B634 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav16nA0A075B634 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav16nA0A075B634 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trav16nA0A075B634 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav16nA0A075B634 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav16nA0A075B634 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav16nA0A075B634 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav16nA0A075B634 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav16nA0A075B634 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trav16nA0A075B634 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav16nA0A075B634 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav16nA0A075B634 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav16nA0A075B634 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Trav16nA0A075B634 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC12.82□□□□□ -0.36
Trav16nA0A075B634 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav16nA0A075B634 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav16nA0A075B634 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav16nA0A075B634 Gm13401-201ENSMUST00000117074 291 ntBASIC12.82□□□□□ -0.36
Trav16nA0A075B634 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav16nA0A075B634 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav16nA0A075B634 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC12.82□□□□□ -0.36
Trav16nA0A075B634 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC12.82□□□□□ -0.36
Trav16nA0A075B634 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav16nA0A075B634 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav16nA0A075B634 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trav16nA0A075B634 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trav16nA0A075B634 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav16nA0A075B634 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav16nA0A075B634 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav16nA0A075B634 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC12.82□□□□□ -0.36
Trav16nA0A075B634 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Trav16nA0A075B634 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav16nA0A075B634 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav16nA0A075B634 Gm19721-201ENSMUST00000195284 1764 ntBASIC12.81□□□□□ -0.36
Trav16nA0A075B634 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav16nA0A075B634 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
Trav16nA0A075B634 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav16nA0A075B634 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav16nA0A075B634 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav16nA0A075B634 Flg-201ENSMUST00000050758 1488 ntBASIC12.81□□□□□ -0.36
Trav16nA0A075B634 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav16nA0A075B634 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
Trav16nA0A075B634 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Trav16nA0A075B634 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trav16nA0A075B634 Mir2861-201ENSMUST00000175539 82 ntBASIC12.81□□□□□ -0.36
Trav16nA0A075B634 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trav16nA0A075B634 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC12.81□□□□□ -0.36
Trav16nA0A075B634 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav16nA0A075B634 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav16nA0A075B634 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav16nA0A075B634 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav16nA0A075B634 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav16nA0A075B634 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trav16nA0A075B634 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trav16nA0A075B634 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Trav16nA0A075B634 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Trav16nA0A075B634 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav16nA0A075B634 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trav16nA0A075B634 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav16nA0A075B634 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav16nA0A075B634 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav16nA0A075B634 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav16nA0A075B634 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav16nA0A075B634 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav16nA0A075B634 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav16nA0A075B634 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav16nA0A075B634 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trav16nA0A075B634 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav16nA0A075B634 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav16nA0A075B634 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav16nA0A075B634 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav16nA0A075B634 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav16nA0A075B634 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav16nA0A075B634 Gm18671-201ENSMUST00000214826 683 ntBASIC12.8□□□□□ -0.36
Trav16nA0A075B634 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC12.8□□□□□ -0.36
Trav16nA0A075B634 Wnt10b-205ENSMUST00000226846 1204 ntBASIC12.8□□□□□ -0.36
Trav16nA0A075B634 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav16nA0A075B634 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav16nA0A075B634 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav16nA0A075B634 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav16nA0A075B634 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav16nA0A075B634 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav16nA0A075B634 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav16nA0A075B634 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav16nA0A075B634 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav16nA0A075B634 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trav16nA0A075B634 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav16nA0A075B634 Gm44443-201ENSMUST00000204396 5633 ntBASIC12.8□□□□□ -0.36
Trav16nA0A075B634 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav16nA0A075B634 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms