Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC12.43□□□□□ -0.42
Trav13d-1A0A075B606 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13d-1A0A075B606 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Trav13d-1A0A075B606 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trav13d-1A0A075B606 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13d-1A0A075B606 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13d-1A0A075B606 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13d-1A0A075B606 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13d-1A0A075B606 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13d-1A0A075B606 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13d-1A0A075B606 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13d-1A0A075B606 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav13d-1A0A075B606 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13d-1A0A075B606 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Trav13d-1A0A075B606 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13d-1A0A075B606 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13d-1A0A075B606 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13d-1A0A075B606 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13d-1A0A075B606 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13d-1A0A075B606 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
Trav13d-1A0A075B606 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13d-1A0A075B606 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav13d-1A0A075B606 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13d-1A0A075B606 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC12.42□□□□□ -0.42
Trav13d-1A0A075B606 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trav13d-1A0A075B606 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13d-1A0A075B606 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13d-1A0A075B606 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13d-1A0A075B606 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13d-1A0A075B606 Mir5130-201ENSMUST00000175160 84 ntBASIC12.42□□□□□ -0.42
Trav13d-1A0A075B606 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trav13d-1A0A075B606 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13d-1A0A075B606 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13d-1A0A075B606 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trav13d-1A0A075B606 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13d-1A0A075B606 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13d-1A0A075B606 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13d-1A0A075B606 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC12.42□□□□□ -0.42
Trav13d-1A0A075B606 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13d-1A0A075B606 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13d-1A0A075B606 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13d-1A0A075B606 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13d-1A0A075B606 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trav13d-1A0A075B606 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13d-1A0A075B606 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13d-1A0A075B606 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13d-1A0A075B606 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13d-1A0A075B606 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC12.41□□□□□ -0.42
Trav13d-1A0A075B606 Gm43338-201ENSMUST00000198617 2223 ntBASIC12.41□□□□□ -0.42
Trav13d-1A0A075B606 Gm45244-201ENSMUST00000211328 2200 ntBASIC12.41□□□□□ -0.42
Trav13d-1A0A075B606 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13d-1A0A075B606 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13d-1A0A075B606 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC12.41□□□□□ -0.42
Trav13d-1A0A075B606 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trav13d-1A0A075B606 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13d-1A0A075B606 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13d-1A0A075B606 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13d-1A0A075B606 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13d-1A0A075B606 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13d-1A0A075B606 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13d-1A0A075B606 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13d-1A0A075B606 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trav13d-1A0A075B606 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13d-1A0A075B606 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13d-1A0A075B606 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13d-1A0A075B606 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13d-1A0A075B606 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13d-1A0A075B606 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13d-1A0A075B606 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13d-1A0A075B606 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13d-1A0A075B606 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13d-1A0A075B606 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trav13d-1A0A075B606 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13d-1A0A075B606 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13d-1A0A075B606 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13d-1A0A075B606 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trav13d-1A0A075B606 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13d-1A0A075B606 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13d-1A0A075B606 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13d-1A0A075B606 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13d-1A0A075B606 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13d-1A0A075B606 Gm7638-201ENSMUST00000121348 967 ntBASIC12.4□□□□□ -0.42
Trav13d-1A0A075B606 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13d-1A0A075B606 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Trav13d-1A0A075B606 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC12.4□□□□□ -0.42
Trav13d-1A0A075B606 Gm45058-201ENSMUST00000205810 766 ntBASIC12.4□□□□□ -0.42
Trav13d-1A0A075B606 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13d-1A0A075B606 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13d-1A0A075B606 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13d-1A0A075B606 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav13d-1A0A075B606 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13d-1A0A075B606 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trav13d-1A0A075B606 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13d-1A0A075B606 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13d-1A0A075B606 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13d-1A0A075B606 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13d-1A0A075B606 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13d-1A0A075B606 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13d-1A0A075B606 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13d-1A0A075B606 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms