Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-6A0A075B603 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-6A0A075B603 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-6A0A075B603 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC12.64□□□□□ -0.39
Trav6-6A0A075B603 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trav6-6A0A075B603 Gm8495-201ENSMUST00000188740 694 ntBASIC12.64□□□□□ -0.39
Trav6-6A0A075B603 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC12.64□□□□□ -0.39
Trav6-6A0A075B603 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav6-6A0A075B603 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-6A0A075B603 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-6A0A075B603 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-6A0A075B603 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-6A0A075B603 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-6A0A075B603 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-6A0A075B603 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-6A0A075B603 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-6A0A075B603 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-6A0A075B603 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-6A0A075B603 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-6A0A075B603 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-6A0A075B603 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-6A0A075B603 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-6A0A075B603 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trav6-6A0A075B603 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav6-6A0A075B603 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trav6-6A0A075B603 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-6A0A075B603 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-6A0A075B603 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-6A0A075B603 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-6A0A075B603 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-6A0A075B603 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-6A0A075B603 Gm10418-201ENSMUST00000100943 576 ntBASIC12.63□□□□□ -0.39
Trav6-6A0A075B603 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC12.63□□□□□ -0.39
Trav6-6A0A075B603 Gm38285-201ENSMUST00000192928 922 ntBASIC12.63□□□□□ -0.39
Trav6-6A0A075B603 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav6-6A0A075B603 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC12.63□□□□□ -0.39
Trav6-6A0A075B603 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-6A0A075B603 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-6A0A075B603 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-6A0A075B603 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-6A0A075B603 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-6A0A075B603 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-6A0A075B603 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-6A0A075B603 Idnk-204ENSMUST00000226010 1898 ntBASIC12.63□□□□□ -0.39
Trav6-6A0A075B603 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-6A0A075B603 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-6A0A075B603 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-6A0A075B603 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-6A0A075B603 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-6A0A075B603 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trav6-6A0A075B603 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-6A0A075B603 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
Trav6-6A0A075B603 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-6A0A075B603 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-6A0A075B603 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-6A0A075B603 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-6A0A075B603 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-6A0A075B603 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-6A0A075B603 Flg-201ENSMUST00000050758 1488 ntBASIC12.62□□□□□ -0.39
Trav6-6A0A075B603 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-6A0A075B603 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-6A0A075B603 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-6A0A075B603 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav6-6A0A075B603 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC12.62□□□□□ -0.39
Trav6-6A0A075B603 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-6A0A075B603 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav6-6A0A075B603 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-6A0A075B603 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-6A0A075B603 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-6A0A075B603 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-6A0A075B603 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trav6-6A0A075B603 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-6A0A075B603 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-6A0A075B603 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trav6-6A0A075B603 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-6A0A075B603 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-6A0A075B603 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trav6-6A0A075B603 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-6A0A075B603 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-6A0A075B603 Gm16011-201ENSMUST00000121567 2662 ntBASIC12.62□□□□□ -0.39
Trav6-6A0A075B603 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-6A0A075B603 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-6A0A075B603 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-6A0A075B603 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-6A0A075B603 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-6A0A075B603 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-6A0A075B603 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-6A0A075B603 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trav6-6A0A075B603 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-6A0A075B603 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav6-6A0A075B603 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-6A0A075B603 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-6A0A075B603 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
Trav6-6A0A075B603 Gm44549-201ENSMUST00000208351 577 ntBASIC12.61□□□□□ -0.39
Trav6-6A0A075B603 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-6A0A075B603 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-6A0A075B603 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-6A0A075B603 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC12.61□□□□□ -0.39
Trav6-6A0A075B603 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-6A0A075B603 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms