Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC13.61□□□□□ -0.23
Trav6-1A0A075B5Z8 AL590614.2-201ENSMUST00000225374 1937 ntBASIC13.61□□□□□ -0.23
Trav6-1A0A075B5Z8 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-1A0A075B5Z8 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-1A0A075B5Z8 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-1A0A075B5Z8 Gm26571-201ENSMUST00000181399 666 ntBASIC13.61□□□□□ -0.23
Trav6-1A0A075B5Z8 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC13.61□□□□□ -0.23
Trav6-1A0A075B5Z8 Gm4974-201ENSMUST00000209974 875 ntBASIC13.61□□□□□ -0.23
Trav6-1A0A075B5Z8 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Trav6-1A0A075B5Z8 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-1A0A075B5Z8 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-1A0A075B5Z8 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-1A0A075B5Z8 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-1A0A075B5Z8 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-1A0A075B5Z8 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-1A0A075B5Z8 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
Trav6-1A0A075B5Z8 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-1A0A075B5Z8 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-1A0A075B5Z8 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav6-1A0A075B5Z8 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-1A0A075B5Z8 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-1A0A075B5Z8 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC13.6□□□□□ -0.23
Trav6-1A0A075B5Z8 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-1A0A075B5Z8 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trav6-1A0A075B5Z8 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trav6-1A0A075B5Z8 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trav6-1A0A075B5Z8 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-1A0A075B5Z8 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-1A0A075B5Z8 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-1A0A075B5Z8 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-1A0A075B5Z8 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trav6-1A0A075B5Z8 Dio3-201ENSMUST00000097228 1449 ntBASIC13.6□□□□□ -0.23
Trav6-1A0A075B5Z8 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-1A0A075B5Z8 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav6-1A0A075B5Z8 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-1A0A075B5Z8 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-1A0A075B5Z8 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-1A0A075B5Z8 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-1A0A075B5Z8 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-1A0A075B5Z8 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
Trav6-1A0A075B5Z8 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-1A0A075B5Z8 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-1A0A075B5Z8 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-1A0A075B5Z8 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-1A0A075B5Z8 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-1A0A075B5Z8 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-1A0A075B5Z8 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC13.59□□□□□ -0.23
Trav6-1A0A075B5Z8 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-1A0A075B5Z8 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-1A0A075B5Z8 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-1A0A075B5Z8 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-1A0A075B5Z8 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-1A0A075B5Z8 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-1A0A075B5Z8 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC13.59□□□□□ -0.23
Trav6-1A0A075B5Z8 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trav6-1A0A075B5Z8 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC13.59□□□□□ -0.23
Trav6-1A0A075B5Z8 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-1A0A075B5Z8 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-1A0A075B5Z8 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-1A0A075B5Z8 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-1A0A075B5Z8 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-1A0A075B5Z8 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Trav6-1A0A075B5Z8 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-1A0A075B5Z8 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-1A0A075B5Z8 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-1A0A075B5Z8 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-1A0A075B5Z8 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-1A0A075B5Z8 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav6-1A0A075B5Z8 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav6-1A0A075B5Z8 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
Trav6-1A0A075B5Z8 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.23
Trav6-1A0A075B5Z8 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-1A0A075B5Z8 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-1A0A075B5Z8 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-1A0A075B5Z8 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-1A0A075B5Z8 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-1A0A075B5Z8 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-1A0A075B5Z8 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC13.58□□□□□ -0.24
Trav6-1A0A075B5Z8 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC13.58□□□□□ -0.24
Trav6-1A0A075B5Z8 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-1A0A075B5Z8 Gm42569-201ENSMUST00000200539 472 ntBASIC13.58□□□□□ -0.24
Trav6-1A0A075B5Z8 Gm44672-201ENSMUST00000206944 1098 ntBASIC13.58□□□□□ -0.24
Trav6-1A0A075B5Z8 AC163280.1-201ENSMUST00000228194 1100 ntBASIC13.58□□□□□ -0.24
Trav6-1A0A075B5Z8 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trav6-1A0A075B5Z8 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-1A0A075B5Z8 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trav6-1A0A075B5Z8 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-1A0A075B5Z8 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-1A0A075B5Z8 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-1A0A075B5Z8 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-1A0A075B5Z8 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC13.58□□□□□ -0.24
Trav6-1A0A075B5Z8 Gm21596-201ENSMUST00000178049 1316 ntBASIC13.58□□□□□ -0.24
Trav6-1A0A075B5Z8 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-1A0A075B5Z8 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-1A0A075B5Z8 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-1A0A075B5Z8 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-1A0A075B5Z8 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-1A0A075B5Z8 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-1A0A075B5Z8 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-1A0A075B5Z8 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms