Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC15.71■□□□□ 0.11
Trav1A0A075B5Z4 Gm7791-201ENSMUST00000219066 539 ntBASIC15.71■□□□□ 0.11
Trav1A0A075B5Z4 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC15.71■□□□□ 0.11
Trav1A0A075B5Z4 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav1A0A075B5Z4 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav1A0A075B5Z4 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav1A0A075B5Z4 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav1A0A075B5Z4 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav1A0A075B5Z4 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav1A0A075B5Z4 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav1A0A075B5Z4 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav1A0A075B5Z4 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Trav1A0A075B5Z4 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav1A0A075B5Z4 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav1A0A075B5Z4 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav1A0A075B5Z4 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.1
Trav1A0A075B5Z4 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav1A0A075B5Z4 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav1A0A075B5Z4 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav1A0A075B5Z4 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav1A0A075B5Z4 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav1A0A075B5Z4 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav1A0A075B5Z4 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav1A0A075B5Z4 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav1A0A075B5Z4 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.7■□□□□ 0.1
Trav1A0A075B5Z4 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav1A0A075B5Z4 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav1A0A075B5Z4 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Trav1A0A075B5Z4 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.7■□□□□ 0.1
Trav1A0A075B5Z4 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.7■□□□□ 0.1
Trav1A0A075B5Z4 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav1A0A075B5Z4 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav1A0A075B5Z4 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC15.7■□□□□ 0.1
Trav1A0A075B5Z4 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC15.7■□□□□ 0.1
Trav1A0A075B5Z4 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC15.7■□□□□ 0.1
Trav1A0A075B5Z4 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC15.7■□□□□ 0.1
Trav1A0A075B5Z4 AC156016.1-201ENSMUST00000227190 1035 ntBASIC15.7■□□□□ 0.1
Trav1A0A075B5Z4 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav1A0A075B5Z4 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav1A0A075B5Z4 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav1A0A075B5Z4 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav1A0A075B5Z4 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav1A0A075B5Z4 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav1A0A075B5Z4 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav1A0A075B5Z4 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav1A0A075B5Z4 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav1A0A075B5Z4 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav1A0A075B5Z4 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav1A0A075B5Z4 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.7■□□□□ 0.1
Trav1A0A075B5Z4 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav1A0A075B5Z4 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav1A0A075B5Z4 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav1A0A075B5Z4 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav1A0A075B5Z4 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav1A0A075B5Z4 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trav1A0A075B5Z4 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav1A0A075B5Z4 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trav1A0A075B5Z4 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav1A0A075B5Z4 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav1A0A075B5Z4 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trav1A0A075B5Z4 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav1A0A075B5Z4 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav1A0A075B5Z4 Gm715-201ENSMUST00000117865 831 ntBASIC15.69■□□□□ 0.1
Trav1A0A075B5Z4 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Trav1A0A075B5Z4 Gm18958-201ENSMUST00000174258 762 ntBASIC15.69■□□□□ 0.1
Trav1A0A075B5Z4 Gm3375-201ENSMUST00000203929 796 ntBASIC15.69■□□□□ 0.1
Trav1A0A075B5Z4 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav1A0A075B5Z4 Otx2os1-204ENSMUST00000227221 751 ntBASIC15.69■□□□□ 0.1
Trav1A0A075B5Z4 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav1A0A075B5Z4 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Trav1A0A075B5Z4 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav1A0A075B5Z4 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav1A0A075B5Z4 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav1A0A075B5Z4 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav1A0A075B5Z4 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav1A0A075B5Z4 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav1A0A075B5Z4 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav1A0A075B5Z4 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC15.68■□□□□ 0.1
Trav1A0A075B5Z4 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav1A0A075B5Z4 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Trav1A0A075B5Z4 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav1A0A075B5Z4 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav1A0A075B5Z4 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC15.68■□□□□ 0.1
Trav1A0A075B5Z4 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC15.68■□□□□ 0.1
Trav1A0A075B5Z4 Gm5297-201ENSMUST00000198555 1171 ntBASIC15.68■□□□□ 0.1
Trav1A0A075B5Z4 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav1A0A075B5Z4 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Trav1A0A075B5Z4 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Trav1A0A075B5Z4 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
Trav1A0A075B5Z4 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav1A0A075B5Z4 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav1A0A075B5Z4 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav1A0A075B5Z4 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Trav1A0A075B5Z4 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC15.68■□□□□ 0.1
Trav1A0A075B5Z4 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav1A0A075B5Z4 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
Trav1A0A075B5Z4 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Trav1A0A075B5Z4 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav1A0A075B5Z4 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav1A0A075B5Z4 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms