Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.02□□□□□ -1.45
SIX2Q9NPC8 AC115283.1-201ENST00000427353 400 ntBASIC6.02□□□□□ -1.45
SIX2Q9NPC8 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC6.02□□□□□ -1.45
SIX2Q9NPC8 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC6.02□□□□□ -1.45
SIX2Q9NPC8 AC009963.4-201ENST00000448535 339 ntBASIC6.02□□□□□ -1.45
SIX2Q9NPC8 RN7SL583P-201ENST00000475692 287 ntBASIC6.02□□□□□ -1.45
SIX2Q9NPC8 RPSAP51-201ENST00000497462 645 ntBASIC6.02□□□□□ -1.45
SIX2Q9NPC8 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC6.02□□□□□ -1.45
SIX2Q9NPC8 CSNK1A1P3-201ENST00000504105 330 ntBASIC6.02□□□□□ -1.45
SIX2Q9NPC8 AC093815.1-201ENST00000508637 280 ntBASIC6.02□□□□□ -1.45
SIX2Q9NPC8 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC6.02□□□□□ -1.45
SIX2Q9NPC8 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC6.02□□□□□ -1.45
SIX2Q9NPC8 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC6.02□□□□□ -1.45
SIX2Q9NPC8 RNA5SP271-201ENST00000516700 88 ntBASIC6.02□□□□□ -1.45
SIX2Q9NPC8 TRAV11-201ENST00000539512 339 ntBASIC6.02□□□□□ -1.45
SIX2Q9NPC8 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.02□□□□□ -1.45
SIX2Q9NPC8 GNG2-208ENST00000554875 430 ntTSL 5 BASIC6.02□□□□□ -1.45
SIX2Q9NPC8 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC6.02□□□□□ -1.45
SIX2Q9NPC8 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6.02□□□□□ -1.45
SIX2Q9NPC8 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SIX2Q9NPC8 AL139124.1-201ENST00000609123 421 ntBASIC6.02□□□□□ -1.45
SIX2Q9NPC8 AL354950.1-201ENST00000614150 568 ntBASIC6.02□□□□□ -1.45
SIX2Q9NPC8 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.02□□□□□ -1.45
SIX2Q9NPC8 RNA5SP439-201ENST00000617595 124 ntBASIC6.02□□□□□ -1.45
SIX2Q9NPC8 AC021766.1-201ENST00000624404 741 ntBASIC6.02□□□□□ -1.45
SIX2Q9NPC8 AC087565.3-203ENST00000641018 837 ntBASIC6.02□□□□□ -1.45
SIX2Q9NPC8 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SIX2Q9NPC8 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC6.02□□□□□ -1.45
SIX2Q9NPC8 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC6.02□□□□□ -1.45
SIX2Q9NPC8 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
SIX2Q9NPC8 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.02□□□□□ -1.45
SIX2Q9NPC8 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SIX2Q9NPC8 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.02□□□□□ -1.45
SIX2Q9NPC8 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SIX2Q9NPC8 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SIX2Q9NPC8 AC091305.2-201ENST00000624049 1576 ntBASIC6.01□□□□□ -1.45
SIX2Q9NPC8 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
SIX2Q9NPC8 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SIX2Q9NPC8 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.01□□□□□ -1.45
SIX2Q9NPC8 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC6.01□□□□□ -1.45
SIX2Q9NPC8 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.01□□□□□ -1.45
SIX2Q9NPC8 AL359715.3-201ENST00000569267 2123 ntBASIC6.01□□□□□ -1.45
SIX2Q9NPC8 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
SIX2Q9NPC8 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC6.01□□□□□ -1.45
SIX2Q9NPC8 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SIX2Q9NPC8 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SIX2Q9NPC8 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SIX2Q9NPC8 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
SIX2Q9NPC8 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
SIX2Q9NPC8 MIR375-201ENST00000362103 64 ntBASIC6.01□□□□□ -1.45
SIX2Q9NPC8 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
SIX2Q9NPC8 AC099535.1-201ENST00000408928 371 ntBASIC6.01□□□□□ -1.45
SIX2Q9NPC8 TRGV5P-201ENST00000419915 354 ntBASIC6.01□□□□□ -1.45
SIX2Q9NPC8 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC6.01□□□□□ -1.45
SIX2Q9NPC8 RIMKLBP2-201ENST00000424737 654 ntBASIC6.01□□□□□ -1.45
SIX2Q9NPC8 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.01□□□□□ -1.45
SIX2Q9NPC8 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC6.01□□□□□ -1.45
SIX2Q9NPC8 HMGN1P2-201ENST00000445197 310 ntBASIC6.01□□□□□ -1.45
SIX2Q9NPC8 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC6.01□□□□□ -1.45
SIX2Q9NPC8 PPIA-203ENST00000451562 544 ntTSL 2 BASIC6.01□□□□□ -1.45
SIX2Q9NPC8 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC6.01□□□□□ -1.45
SIX2Q9NPC8 AC019084.1-201ENST00000457337 432 ntBASIC6.01□□□□□ -1.45
SIX2Q9NPC8 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
SIX2Q9NPC8 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC6.01□□□□□ -1.45
SIX2Q9NPC8 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC6.01□□□□□ -1.45
SIX2Q9NPC8 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC6.01□□□□□ -1.45
SIX2Q9NPC8 AC091912.1-201ENST00000511351 248 ntBASIC6.01□□□□□ -1.45
SIX2Q9NPC8 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC6.01□□□□□ -1.45
SIX2Q9NPC8 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC6.01□□□□□ -1.45
SIX2Q9NPC8 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC6.01□□□□□ -1.45
SIX2Q9NPC8 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC6.01□□□□□ -1.45
SIX2Q9NPC8 AL512356.3-201ENST00000623005 461 ntBASIC6.01□□□□□ -1.45
SIX2Q9NPC8 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC6.01□□□□□ -1.45
SIX2Q9NPC8 AC109446.4-201ENST00000623235 2755 ntBASIC6.01□□□□□ -1.45
SIX2Q9NPC8 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SIX2Q9NPC8 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
SIX2Q9NPC8 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
SIX2Q9NPC8 EEF1A1P30-201ENST00000429708 1315 ntBASIC6□□□□□ -1.45
SIX2Q9NPC8 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
SIX2Q9NPC8 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC6□□□□□ -1.45
SIX2Q9NPC8 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6□□□□□ -1.45
SIX2Q9NPC8 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6□□□□□ -1.45
SIX2Q9NPC8 AL137918.1-201ENST00000624542 1922 ntBASIC6□□□□□ -1.45
SIX2Q9NPC8 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6□□□□□ -1.45
SIX2Q9NPC8 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6□□□□□ -1.45
SIX2Q9NPC8 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SIX2Q9NPC8 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC6□□□□□ -1.45
SIX2Q9NPC8 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC6□□□□□ -1.45
SIX2Q9NPC8 CXADRP1-201ENST00000398098 1095 ntBASIC6□□□□□ -1.45
SIX2Q9NPC8 ADAM24P-201ENST00000398655 2101 ntBASIC6□□□□□ -1.45
SIX2Q9NPC8 AL009179.1-201ENST00000406085 265 ntBASIC6□□□□□ -1.45
SIX2Q9NPC8 EEF1A1P29-201ENST00000416082 1096 ntBASIC6□□□□□ -1.45
SIX2Q9NPC8 AC009784.1-201ENST00000426484 460 ntBASIC6□□□□□ -1.45
SIX2Q9NPC8 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC6□□□□□ -1.45
SIX2Q9NPC8 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC6□□□□□ -1.45
SIX2Q9NPC8 AP000547.1-201ENST00000454360 617 ntBASIC6□□□□□ -1.45
SIX2Q9NPC8 OR2A1-AS1-202ENST00000467944 422 ntBASIC6□□□□□ -1.45
SIX2Q9NPC8 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6□□□□□ -1.45
SIX2Q9NPC8 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC6□□□□□ -1.45
SIX2Q9NPC8 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms