Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 AC144671.1-201ENSMUST00000215265 99 ntBASIC1,83□□□□□ -2,12
Sox18P43680 Mir377-201ENSMUST00000083504 68 ntBASIC1,83□□□□□ -2,12
Sox18P43680 Gm22761-201ENSMUST00000102278 96 ntBASIC1,82□□□□□ -2,12
Sox18P43680 Gm25040-201ENSMUST00000103877 66 ntBASIC1,82□□□□□ -2,12
Sox18P43680 Mir3968-201ENSMUST00000175355 100 ntBASIC1,82□□□□□ -2,12
Sox18P43680 Snord96a-201ENSMUST00000082791 81 ntBASIC1,82□□□□□ -2,12
Sox18P43680 Gm26274-201ENSMUST00000157103 321 ntBASIC1,81□□□□□ -2,12
Sox18P43680 Gm24478-201ENSMUST00000157439 158 ntBASIC1,81□□□□□ -2,12
Sox18P43680 Gm22087-201ENSMUST00000158339 88 ntBASIC1,81□□□□□ -2,12
Sox18P43680 Scarna3a-201ENSMUST00000158911 140 ntBASIC1,81□□□□□ -2,12
Sox18P43680 Mir7673-201ENSMUST00000184567 64 ntBASIC1,81□□□□□ -2,12
Sox18P43680 Mir7217-201ENSMUST00000200304 62 ntBASIC1,81□□□□□ -2,12
Sox18P43680 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1,81□□□□□ -2,12
Sox18P43680 Snord69-201ENSMUST00000104024 80 ntBASIC1,8□□□□□ -2,12
Sox18P43680 Gm23012-201ENSMUST00000104149 83 ntBASIC1,8□□□□□ -2,12
Sox18P43680 Gm25170-201ENSMUST00000104191 129 ntBASIC1,8□□□□□ -2,12
Sox18P43680 Gm25648-201ENSMUST00000177844 79 ntBASIC1,8□□□□□ -2,12
Sox18P43680 Gm25936-201ENSMUST00000179952 114 ntBASIC1,8□□□□□ -2,12
Sox18P43680 Gm25402-201ENSMUST00000082966 131 ntBASIC1,8□□□□□ -2,12
Sox18P43680 Gm24612-201ENSMUST00000083267 107 ntBASIC1,8□□□□□ -2,12
Sox18P43680 Mir200b-201ENSMUST00000083615 70 ntBASIC1,8□□□□□ -2,12
Sox18P43680 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1,8□□□□□ -2,12
Sox18P43680 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC1,79□□□□□ -2,12
Sox18P43680 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1,79□□□□□ -2,12
Sox18P43680 Gm27265-201ENSMUST00000183559 77 ntBASIC1,79□□□□□ -2,12
Sox18P43680 Gm37778-201ENSMUST00000191732 190 ntBASIC1,79□□□□□ -2,12
Sox18P43680 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1,79□□□□□ -2,12
Sox18P43680 Gm24902-201ENSMUST00000158126 123 ntBASIC1,78□□□□□ -2,12
Sox18P43680 Mir7665-201ENSMUST00000184907 63 ntBASIC1,78□□□□□ -2,12
Sox18P43680 Snord95-201ENSMUST00000082846 68 ntBASIC1,78□□□□□ -2,12
Sox18P43680 Gm23730-201ENSMUST00000083236 107 ntBASIC1,78□□□□□ -2,12
Sox18P43680 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1,78□□□□□ -2,13
Sox18P43680 Gm43960-201ENSMUST00000204249 5020 ntBASIC1,77□□□□□ -2,13
Sox18P43680 Mir669h-201ENSMUST00000116944 125 ntBASIC1,77□□□□□ -2,13
Sox18P43680 Trav5n-3-201ENSMUST00000164511 270 ntBASIC1,77□□□□□ -2,13
Sox18P43680 Gm27420-201ENSMUST00000183823 79 ntBASIC1,77□□□□□ -2,13
Sox18P43680 Mir6240-201ENSMUST00000184281 117 ntBASIC1,77□□□□□ -2,13
Sox18P43680 Mir148b-201ENSMUST00000083626 97 ntBASIC1,77□□□□□ -2,13
Sox18P43680 Gm25524-201ENSMUST00000101821 107 ntBASIC1,76□□□□□ -2,13
Sox18P43680 Gm22401-201ENSMUST00000174927 117 ntBASIC1,76□□□□□ -2,13
Sox18P43680 Mir3098-201ENSMUST00000175416 87 ntBASIC1,76□□□□□ -2,13
Sox18P43680 Gm23410-201ENSMUST00000179967 107 ntBASIC1,76□□□□□ -2,13
Sox18P43680 Gm27937-201ENSMUST00000183605 88 ntBASIC1,76□□□□□ -2,13
Sox18P43680 Gm26224-201ENSMUST00000082506 80 ntBASIC1,76□□□□□ -2,13
Sox18P43680 Gm22505-201ENSMUST00000082956 108 ntBASIC1,76□□□□□ -2,13
Sox18P43680 Gm22363-201ENSMUST00000083100 108 ntBASIC1,76□□□□□ -2,13
Sox18P43680 Gm23814-201ENSMUST00000083230 102 ntBASIC1,76□□□□□ -2,13
Sox18P43680 Gm25831-201ENSMUST00000158924 163 ntBASIC1,75□□□□□ -2,13
Sox18P43680 AC129085.5-201ENSMUST00000225468 400 ntBASIC1,75□□□□□ -2,13
Sox18P43680 Gm24151-201ENSMUST00000082758 141 ntBASIC1,75□□□□□ -2,13
Sox18P43680 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1,75□□□□□ -2,13
Sox18P43680 Gm13065-201ENSMUST00000119178 141 ntBASIC1,74□□□□□ -2,13
Sox18P43680 Gm12432-201ENSMUST00000119540 186 ntBASIC1,74□□□□□ -2,13
Sox18P43680 Gm27717-201ENSMUST00000183933 151 ntBASIC1,74□□□□□ -2,13
Sox18P43680 AC117232.1-201ENSMUST00000197964 119 ntBASIC1,74□□□□□ -2,13
Sox18P43680 Gm22652-201ENSMUST00000083207 131 ntBASIC1,74□□□□□ -2,13
Sox18P43680 Mir92-2-201ENSMUST00000083679 91 ntBASIC1,74□□□□□ -2,13
Sox18P43680 n-R5s12-201ENSMUST00000083785 119 ntBASIC1,74□□□□□ -2,13
Sox18P43680 Gm23347-201ENSMUST00000083823 82 ntBASIC1,74□□□□□ -2,13
Sox18P43680 Gm6272-201ENSMUST00000121256 171 ntBASIC1,73□□□□□ -2,13
Sox18P43680 Gm25968-201ENSMUST00000157167 100 ntBASIC1,73□□□□□ -2,13
Sox18P43680 Gm22663-201ENSMUST00000158721 102 ntBASIC1,73□□□□□ -2,13
Sox18P43680 Gm23813-201ENSMUST00000175153 77 ntBASIC1,73□□□□□ -2,13
Sox18P43680 Mir1949-202ENSMUST00000199259 70 ntBASIC1,73□□□□□ -2,13
Sox18P43680 AC238676.2-201ENSMUST00000220910 94 ntBASIC1,73□□□□□ -2,13
Sox18P43680 Gm22459-201ENSMUST00000082577 108 ntBASIC1,73□□□□□ -2,13
Sox18P43680 Gm26438-201ENSMUST00000082593 107 ntBASIC1,73□□□□□ -2,13
Sox18P43680 Gm23469-201ENSMUST00000157131 104 ntBASIC1,72□□□□□ -2,13
Sox18P43680 Gm25465-201ENSMUST00000157716 105 ntBASIC1,72□□□□□ -2,13
Sox18P43680 Gm23630-201ENSMUST00000175292 104 ntBASIC1,72□□□□□ -2,13
Sox18P43680 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1,72□□□□□ -2,13
Sox18P43680 Mir6950-201ENSMUST00000184438 73 ntBASIC1,72□□□□□ -2,13
Sox18P43680 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1,72□□□□□ -2,13
Sox18P43680 Mir448-201ENSMUST00000083516 112 ntBASIC1,72□□□□□ -2,13
Sox18P43680 Mir30d-201ENSMUST00000083503 82 ntBASIC1,71□□□□□ -2,14
Sox18P43680 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC1,71□□□□□ -2,14
Sox18P43680 Gm25541-201ENSMUST00000116888 126 ntBASIC1,7□□□□□ -2,14
Sox18P43680 Gm22717-201ENSMUST00000122703 171 ntBASIC1,7□□□□□ -2,14
Sox18P43680 Mir500-201ENSMUST00000093600 92 ntBASIC1,7□□□□□ -2,14
Sox18P43680 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1,7□□□□□ -2,14
Sox18P43680 Gm24342-201ENSMUST00000103907 104 ntBASIC1,69□□□□□ -2,14
Sox18P43680 Gm23708-201ENSMUST00000104367 123 ntBASIC1,69□□□□□ -2,14
Sox18P43680 Gm24500-201ENSMUST00000158447 124 ntBASIC1,69□□□□□ -2,14
Sox18P43680 Gm24770-201ENSMUST00000158505 92 ntBASIC1,69□□□□□ -2,14
Sox18P43680 Gm26301-201ENSMUST00000104813 95 ntBASIC1,68□□□□□ -2,14
Sox18P43680 Gm24262-201ENSMUST00000157431 144 ntBASIC1,68□□□□□ -2,14
Sox18P43680 Mir6394-201ENSMUST00000184738 99 ntBASIC1,68□□□□□ -2,14
Sox18P43680 Gm29344-201ENSMUST00000068143 210 ntBASIC1,68□□□□□ -2,14
Sox18P43680 Gm28383-201ENSMUST00000187563 139 ntBASIC1,67□□□□□ -2,14
Sox18P43680 Gm38323-201ENSMUST00000192450 210 ntBASIC1,67□□□□□ -2,14
Sox18P43680 Mir6962-201ENSMUST00000199512 63 ntBASIC1,67□□□□□ -2,14
Sox18P43680 Gm24233-201ENSMUST00000104317 122 ntBASIC1,66□□□□□ -2,14
Sox18P43680 Gm25279-201ENSMUST00000122608 133 ntBASIC1,66□□□□□ -2,14
Sox18P43680 U6.1-201ENSMUST00000157443 101 ntBASIC1,66□□□□□ -2,14
Sox18P43680 Scarna3b-201ENSMUST00000157533 139 ntBASIC1,66□□□□□ -2,14
Sox18P43680 Gm27511-201ENSMUST00000183502 127 ntBASIC1,66□□□□□ -2,14
Sox18P43680 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1,66□□□□□ -2,14
Sox18P43680 Mir653-201ENSMUST00000102402 85 ntBASIC1,65□□□□□ -2,15
Sox18P43680 Gm22494-201ENSMUST00000104495 128 ntBASIC1,65□□□□□ -2,15
Sox18P43680 Gm14533-201ENSMUST00000117088 93 ntBASIC1,65□□□□□ -2,15
Retrieved 100 of 76,532 protein–RNA pairs in 98,5 ms