Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CCDC50Q8IVM0 RN7SKP77-201ENST00000363261 353 ntBASIC6.09□□□□□ -1.43
CCDC50Q8IVM0 RN7SKP78-201ENST00000364711 318 ntBASIC6.09□□□□□ -1.43
CCDC50Q8IVM0 RBBP4P5-201ENST00000398583 1266 ntBASIC6.09□□□□□ -1.43
CCDC50Q8IVM0 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC6.09□□□□□ -1.43
CCDC50Q8IVM0 AC015983.1-201ENST00000441577 373 ntBASIC6.09□□□□□ -1.43
CCDC50Q8IVM0 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.09□□□□□ -1.43
CCDC50Q8IVM0 CBX1P2-201ENST00000453841 458 ntBASIC6.09□□□□□ -1.43
CCDC50Q8IVM0 RN7SL269P-201ENST00000467795 305 ntBASIC6.09□□□□□ -1.43
CCDC50Q8IVM0 AC098818.1-201ENST00000478593 252 ntBASIC6.09□□□□□ -1.43
CCDC50Q8IVM0 PDCL3P4-201ENST00000489621 720 ntBASIC6.09□□□□□ -1.43
CCDC50Q8IVM0 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.09□□□□□ -1.43
CCDC50Q8IVM0 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC6.09□□□□□ -1.43
CCDC50Q8IVM0 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.09□□□□□ -1.43
CCDC50Q8IVM0 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.09□□□□□ -1.43
CCDC50Q8IVM0 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.09□□□□□ -1.43
CCDC50Q8IVM0 AC126615.2-201ENST00000553003 515 ntBASIC6.09□□□□□ -1.43
CCDC50Q8IVM0 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.09□□□□□ -1.43
CCDC50Q8IVM0 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.09□□□□□ -1.43
CCDC50Q8IVM0 AC092332.1-201ENST00000563684 829 ntBASIC6.09□□□□□ -1.43
CCDC50Q8IVM0 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC6.09□□□□□ -1.43
CCDC50Q8IVM0 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.09□□□□□ -1.43
CCDC50Q8IVM0 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.09□□□□□ -1.43
CCDC50Q8IVM0 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
CCDC50Q8IVM0 AL034374.2-201ENST00000605281 548 ntBASIC6.09□□□□□ -1.43
CCDC50Q8IVM0 AL139099.4-201ENST00000614802 114 ntBASIC6.09□□□□□ -1.43
CCDC50Q8IVM0 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.09□□□□□ -1.43
CCDC50Q8IVM0 OR11H2-202ENST00000641517 1085 ntBASIC6.09□□□□□ -1.43
CCDC50Q8IVM0 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.44
CCDC50Q8IVM0 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.09□□□□□ -1.44
CCDC50Q8IVM0 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
CCDC50Q8IVM0 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
CCDC50Q8IVM0 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.09□□□□□ -1.44
CCDC50Q8IVM0 MFSD8-239ENST00000641590 2479 ntBASIC6.08□□□□□ -1.44
CCDC50Q8IVM0 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
CCDC50Q8IVM0 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.08□□□□□ -1.44
CCDC50Q8IVM0 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC50Q8IVM0 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.08□□□□□ -1.44
CCDC50Q8IVM0 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC6.08□□□□□ -1.44
CCDC50Q8IVM0 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC6.08□□□□□ -1.44
CCDC50Q8IVM0 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC50Q8IVM0 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
CCDC50Q8IVM0 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
CCDC50Q8IVM0 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
CCDC50Q8IVM0 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.08□□□□□ -1.44
CCDC50Q8IVM0 AC073476.1-201ENST00000452854 407 ntBASIC6.08□□□□□ -1.44
CCDC50Q8IVM0 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.08□□□□□ -1.44
CCDC50Q8IVM0 AL157777.1-201ENST00000468100 304 ntBASIC6.08□□□□□ -1.44
CCDC50Q8IVM0 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC6.08□□□□□ -1.44
CCDC50Q8IVM0 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC6.08□□□□□ -1.44
CCDC50Q8IVM0 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.08□□□□□ -1.44
CCDC50Q8IVM0 BCAS2P1-201ENST00000528022 632 ntBASIC6.08□□□□□ -1.44
CCDC50Q8IVM0 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC6.08□□□□□ -1.44
CCDC50Q8IVM0 AC084824.2-201ENST00000548906 345 ntBASIC6.08□□□□□ -1.44
CCDC50Q8IVM0 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.08□□□□□ -1.44
CCDC50Q8IVM0 AC121758.1-202ENST00000556917 658 ntBASIC6.08□□□□□ -1.44
CCDC50Q8IVM0 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
CCDC50Q8IVM0 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.08□□□□□ -1.44
CCDC50Q8IVM0 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.08□□□□□ -1.44
CCDC50Q8IVM0 AC145423.1-201ENST00000605712 336 ntBASIC6.08□□□□□ -1.44
CCDC50Q8IVM0 AL353729.2-201ENST00000605859 1249 ntBASIC6.08□□□□□ -1.44
CCDC50Q8IVM0 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.08□□□□□ -1.44
CCDC50Q8IVM0 AC103703.1-201ENST00000634783 663 ntBASIC6.08□□□□□ -1.44
CCDC50Q8IVM0 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC50Q8IVM0 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC50Q8IVM0 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
CCDC50Q8IVM0 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC50Q8IVM0 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC50Q8IVM0 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC50Q8IVM0 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC50Q8IVM0 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC50Q8IVM0 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC6.07□□□□□ -1.44
CCDC50Q8IVM0 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
CCDC50Q8IVM0 NR1H5P-201ENST00000452683 1377 ntBASIC6.07□□□□□ -1.44
CCDC50Q8IVM0 HSPD1P9-201ENST00000420325 1636 ntBASIC6.07□□□□□ -1.44
CCDC50Q8IVM0 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC50Q8IVM0 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC6.07□□□□□ -1.44
CCDC50Q8IVM0 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC50Q8IVM0 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC6.07□□□□□ -1.44
CCDC50Q8IVM0 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC50Q8IVM0 RNA5SP91-201ENST00000390902 119 ntBASIC6.07□□□□□ -1.44
CCDC50Q8IVM0 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6.07□□□□□ -1.44
CCDC50Q8IVM0 RPL35AP3-201ENST00000414680 288 ntBASIC6.07□□□□□ -1.44
CCDC50Q8IVM0 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.07□□□□□ -1.44
CCDC50Q8IVM0 GNG5P5-201ENST00000420444 220 ntBASIC6.07□□□□□ -1.44
CCDC50Q8IVM0 KIF4CP-201ENST00000422742 1279 ntBASIC6.07□□□□□ -1.44
CCDC50Q8IVM0 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.07□□□□□ -1.44
CCDC50Q8IVM0 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC6.07□□□□□ -1.44
CCDC50Q8IVM0 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC6.07□□□□□ -1.44
CCDC50Q8IVM0 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC6.07□□□□□ -1.44
CCDC50Q8IVM0 AL354893.1-201ENST00000433735 348 ntBASIC6.07□□□□□ -1.44
CCDC50Q8IVM0 AC242426.1-201ENST00000435270 960 ntBASIC6.07□□□□□ -1.44
CCDC50Q8IVM0 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.07□□□□□ -1.44
CCDC50Q8IVM0 RPL6P30-201ENST00000443382 862 ntBASIC6.07□□□□□ -1.44
CCDC50Q8IVM0 RPL5P7-201ENST00000444235 813 ntBASIC6.07□□□□□ -1.44
CCDC50Q8IVM0 MEMO1P4-201ENST00000453590 386 ntBASIC6.07□□□□□ -1.44
CCDC50Q8IVM0 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC6.07□□□□□ -1.44
CCDC50Q8IVM0 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC6.07□□□□□ -1.44
CCDC50Q8IVM0 RN7SL568P-201ENST00000493069 298 ntBASIC6.07□□□□□ -1.44
CCDC50Q8IVM0 AC023424.1-201ENST00000496058 459 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms