Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm23500-201ENSMUST00000157735 98 ntBASIC2,1□□□□□ -2,07
Trim47Q8C0E3 Gm22556-201ENSMUST00000157803 100 ntBASIC2,1□□□□□ -2,07
Trim47Q8C0E3 Gm22401-201ENSMUST00000174927 117 ntBASIC2,1□□□□□ -2,07
Trim47Q8C0E3 Gm23813-201ENSMUST00000175153 77 ntBASIC2,1□□□□□ -2,07
Trim47Q8C0E3 Snora75-201ENSMUST00000082903 133 ntBASIC2,1□□□□□ -2,07
Trim47Q8C0E3 Gm25110-201ENSMUST00000116684 121 ntBASIC2,09□□□□□ -2,07
Trim47Q8C0E3 Gm25775-201ENSMUST00000116716 121 ntBASIC2,09□□□□□ -2,07
Trim47Q8C0E3 Gm24795-201ENSMUST00000116737 121 ntBASIC2,09□□□□□ -2,07
Trim47Q8C0E3 Gm25171-201ENSMUST00000116926 121 ntBASIC2,09□□□□□ -2,07
Trim47Q8C0E3 n-R5s70-201ENSMUST00000122650 116 ntBASIC2,09□□□□□ -2,07
Trim47Q8C0E3 Gm23106-201ENSMUST00000157554 101 ntBASIC2,09□□□□□ -2,07
Trim47Q8C0E3 Gm22801-201ENSMUST00000175624 84 ntBASIC2,09□□□□□ -2,07
Trim47Q8C0E3 Gm25648-201ENSMUST00000177844 79 ntBASIC2,09□□□□□ -2,07
Trim47Q8C0E3 Gm22862-201ENSMUST00000178593 121 ntBASIC2,09□□□□□ -2,07
Trim47Q8C0E3 Gm24638-201ENSMUST00000179807 132 ntBASIC2,09□□□□□ -2,07
Trim47Q8C0E3 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC2,09□□□□□ -2,07
Trim47Q8C0E3 Gm27511-201ENSMUST00000183502 127 ntBASIC2,09□□□□□ -2,07
Trim47Q8C0E3 Gm44948-201ENSMUST00000209050 149 ntBASIC2,09□□□□□ -2,07
Trim47Q8C0E3 Gm25759-201ENSMUST00000103988 129 ntBASIC2,08□□□□□ -2,08
Trim47Q8C0E3 U6.1-201ENSMUST00000157443 101 ntBASIC2,08□□□□□ -2,08
Trim47Q8C0E3 Mir9-3-201ENSMUST00000175497 90 ntBASIC2,08□□□□□ -2,08
Trim47Q8C0E3 Gm36956-201ENSMUST00000193830 214 ntBASIC2,08□□□□□ -2,08
Trim47Q8C0E3 Gm44488-201ENSMUST00000199467 119 ntBASIC2,08□□□□□ -2,08
Trim47Q8C0E3 Gm26922-201ENSMUST00000082687 72 ntBASIC2,08□□□□□ -2,08
Trim47Q8C0E3 Gm22203-201ENSMUST00000158605 58 ntBASIC2,07□□□□□ -2,08
Trim47Q8C0E3 Gm27517-201ENSMUST00000184347 236 ntBASIC2,07□□□□□ -2,08
Trim47Q8C0E3 Gm27993-201ENSMUST00000184362 85 ntBASIC2,07□□□□□ -2,08
Trim47Q8C0E3 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC2,07□□□□□ -2,08
Trim47Q8C0E3 CT485608.2-201ENSMUST00000227210 291 ntBASIC2,07□□□□□ -2,08
Trim47Q8C0E3 Gm22030-201ENSMUST00000116942 63 ntBASIC2,06□□□□□ -2,08
Trim47Q8C0E3 Gm25730-201ENSMUST00000178753 165 ntBASIC2,06□□□□□ -2,08
Trim47Q8C0E3 Gm23714-201ENSMUST00000179259 105 ntBASIC2,06□□□□□ -2,08
Trim47Q8C0E3 Gm45655-201ENSMUST00000211625 160 ntBASIC2,06□□□□□ -2,08
Trim47Q8C0E3 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC2,05□□□□□ -2,08
Trim47Q8C0E3 Gm24076-201ENSMUST00000158179 94 ntBASIC2,05□□□□□ -2,08
Trim47Q8C0E3 Mir7679-201ENSMUST00000183379 63 ntBASIC2,05□□□□□ -2,08
Trim47Q8C0E3 Snord14a-201ENSMUST00000082807 87 ntBASIC2,05□□□□□ -2,08
Trim47Q8C0E3 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC2,04□□□□□ -2,08
Trim47Q8C0E3 Gm24476-201ENSMUST00000157437 131 ntBASIC2,04□□□□□ -2,08
Trim47Q8C0E3 Gm24073-201ENSMUST00000158177 106 ntBASIC2,04□□□□□ -2,08
Trim47Q8C0E3 Gm25641-201ENSMUST00000175135 108 ntBASIC2,04□□□□□ -2,08
Trim47Q8C0E3 Mir7021-201ENSMUST00000197026 63 ntBASIC2,04□□□□□ -2,08
Trim47Q8C0E3 Gm23730-201ENSMUST00000083236 107 ntBASIC2,04□□□□□ -2,08
Trim47Q8C0E3 Mir544-201ENSMUST00000103813 78 ntBASIC2,03□□□□□ -2,08
Trim47Q8C0E3 Gm25328-201ENSMUST00000175013 107 ntBASIC2,03□□□□□ -2,08
Trim47Q8C0E3 Mir468-201ENSMUST00000197332 78 ntBASIC2,03□□□□□ -2,08
Trim47Q8C0E3 Mir709-201ENSMUST00000102190 88 ntBASIC2,02□□□□□ -2,09
Trim47Q8C0E3 Mir7678-201ENSMUST00000185076 71 ntBASIC2,02□□□□□ -2,09
Trim47Q8C0E3 CT030170.1-201ENSMUST00000222183 148 ntBASIC2,02□□□□□ -2,09
Trim47Q8C0E3 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC2,01□□□□□ -2,09
Trim47Q8C0E3 Mir301b-201ENSMUST00000102333 97 ntBASIC2,01□□□□□ -2,09
Trim47Q8C0E3 Gm22494-201ENSMUST00000104495 128 ntBASIC2,01□□□□□ -2,09
Trim47Q8C0E3 Gm23336-201ENSMUST00000117023 123 ntBASIC2,01□□□□□ -2,09
Trim47Q8C0E3 Gm24770-201ENSMUST00000158505 92 ntBASIC2,01□□□□□ -2,09
Trim47Q8C0E3 Gm22929-201ENSMUST00000175517 107 ntBASIC2,01□□□□□ -2,09
Trim47Q8C0E3 Gm23419-201ENSMUST00000175523 84 ntBASIC2,01□□□□□ -2,09
Trim47Q8C0E3 Mir6950-201ENSMUST00000184438 73 ntBASIC2,01□□□□□ -2,09
Trim47Q8C0E3 Mir6352-201ENSMUST00000184495 116 ntBASIC2,01□□□□□ -2,09
Trim47Q8C0E3 Gm27977-201ENSMUST00000185159 111 ntBASIC2,01□□□□□ -2,09
Trim47Q8C0E3 Gm29432-201ENSMUST00000185397 139 ntBASIC2,01□□□□□ -2,09
Trim47Q8C0E3 AC238676.2-201ENSMUST00000220910 94 ntBASIC2,01□□□□□ -2,09
Trim47Q8C0E3 Gm23060-201ENSMUST00000102345 109 ntBASIC2□□□□□ -2,09
Trim47Q8C0E3 Gm25416-201ENSMUST00000104221 107 ntBASIC2□□□□□ -2,09
Trim47Q8C0E3 Snord2-201ENSMUST00000157899 69 ntBASIC2□□□□□ -2,09
Trim47Q8C0E3 Gm43944-201ENSMUST00000205220 120 ntBASIC2□□□□□ -2,09
Trim47Q8C0E3 Gm24612-201ENSMUST00000083267 107 ntBASIC2□□□□□ -2,09
Trim47Q8C0E3 Traj53-201ENSMUST00000103690 66 ntAPPRIS P1 BASIC1,99□□□□□ -2,09
Trim47Q8C0E3 Gm24229-201ENSMUST00000158830 118 ntBASIC1,99□□□□□ -2,09
Trim47Q8C0E3 Mir3108-201ENSMUST00000175500 79 ntBASIC1,99□□□□□ -2,09
Trim47Q8C0E3 AL928567.1-201ENSMUST00000197891 138 ntBASIC1,99□□□□□ -2,09
Trim47Q8C0E3 Gm24580-201ENSMUST00000103965 131 ntBASIC1,98□□□□□ -2,09
Trim47Q8C0E3 Gm25832-201ENSMUST00000104140 130 ntBASIC1,98□□□□□ -2,09
Trim47Q8C0E3 Gm25035-201ENSMUST00000175414 77 ntBASIC1,98□□□□□ -2,09
Trim47Q8C0E3 Gm23301-201ENSMUST00000082713 65 ntBASIC1,98□□□□□ -2,09
Trim47Q8C0E3 Snord1a-201ENSMUST00000083160 74 ntBASIC1,98□□□□□ -2,09
Trim47Q8C0E3 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1,98□□□□□ -2,09
Trim47Q8C0E3 Gm23991-201ENSMUST00000117033 93 ntBASIC1,97□□□□□ -2,09
Trim47Q8C0E3 Gm23114-201ENSMUST00000158478 117 ntBASIC1,97□□□□□ -2,09
Trim47Q8C0E3 Gm44384-201ENSMUST00000200208 114 ntBASIC1,97□□□□□ -2,09
Trim47Q8C0E3 Gm23100-201ENSMUST00000083455 141 ntBASIC1,97□□□□□ -2,09
Trim47Q8C0E3 Gm25068-201ENSMUST00000103895 110 ntBASIC1,96□□□□□ -2,1
Trim47Q8C0E3 Gm25279-201ENSMUST00000122608 133 ntBASIC1,96□□□□□ -2,1
Trim47Q8C0E3 Gm25663-201ENSMUST00000157698 135 ntBASIC1,96□□□□□ -2,1
Trim47Q8C0E3 Gm22541-201ENSMUST00000158165 127 ntBASIC1,96□□□□□ -2,1
Trim47Q8C0E3 Mir1961-201ENSMUST00000158643 112 ntBASIC1,96□□□□□ -2,1
Trim47Q8C0E3 Gm37778-201ENSMUST00000191732 190 ntBASIC1,96□□□□□ -2,1
Trim47Q8C0E3 Gm24624-201ENSMUST00000082617 164 ntBASIC1,96□□□□□ -2,1
Trim47Q8C0E3 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1,95□□□□□ -2,1
Trim47Q8C0E3 Mir223-201ENSMUST00000102112 110 ntBASIC1,95□□□□□ -2,1
Trim47Q8C0E3 Gm24379-201ENSMUST00000122695 86 ntBASIC1,95□□□□□ -2,1
Trim47Q8C0E3 Gm24783-201ENSMUST00000157639 100 ntBASIC1,95□□□□□ -2,1
Trim47Q8C0E3 Gm22087-201ENSMUST00000158339 88 ntBASIC1,95□□□□□ -2,1
Trim47Q8C0E3 Gm28383-201ENSMUST00000187563 139 ntBASIC1,95□□□□□ -2,1
Trim47Q8C0E3 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1,94□□□□□ -2,1
Trim47Q8C0E3 Gm22717-201ENSMUST00000122703 171 ntBASIC1,94□□□□□ -2,1
Trim47Q8C0E3 Gm23267-201ENSMUST00000178490 132 ntBASIC1,94□□□□□ -2,1
Trim47Q8C0E3 Gm18433-201ENSMUST00000192747 197 ntBASIC1,94□□□□□ -2,1
Trim47Q8C0E3 Gm29344-201ENSMUST00000068143 210 ntBASIC1,94□□□□□ -2,1
Trim47Q8C0E3 Gm22786-201ENSMUST00000104086 122 ntBASIC1,93□□□□□ -2,1
Trim47Q8C0E3 Gm24984-201ENSMUST00000104454 133 ntBASIC1,93□□□□□ -2,1
Retrieved 100 of 76,532 protein–RNA pairs in 11,1 ms