Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 U6.1-201ENSMUST00000157443 101 ntBASIC2.14□□□□□ -2.07
Col17a1Q07563 Gm43038-201ENSMUST00000202359 88 ntBASIC2.14□□□□□ -2.07
Col17a1Q07563 Gm26207-201ENSMUST00000082909 104 ntBASIC2.14□□□□□ -2.07
Col17a1Q07563 Gm26062-201ENSMUST00000083379 107 ntBASIC2.14□□□□□ -2.07
Col17a1Q07563 Mir301-201ENSMUST00000083655 86 ntBASIC2.14□□□□□ -2.07
Col17a1Q07563 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC2.13□□□□□ -2.07
Col17a1Q07563 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Col17a1Q07563 n-R5s15-201ENSMUST00000122635 111 ntBASIC2.13□□□□□ -2.07
Col17a1Q07563 n-R5s188-201ENSMUST00000122646 105 ntBASIC2.13□□□□□ -2.07
Col17a1Q07563 Gm23390-201ENSMUST00000157393 106 ntBASIC2.13□□□□□ -2.07
Col17a1Q07563 Gm22338-201ENSMUST00000157715 129 ntBASIC2.13□□□□□ -2.07
Col17a1Q07563 Gm26499-201ENSMUST00000178544 79 ntBASIC2.13□□□□□ -2.07
Col17a1Q07563 Gm23306-201ENSMUST00000179058 105 ntBASIC2.13□□□□□ -2.07
Col17a1Q07563 Gm26096-201ENSMUST00000179084 79 ntBASIC2.13□□□□□ -2.07
Col17a1Q07563 Gm42807-201ENSMUST00000200141 329 ntBASIC2.13□□□□□ -2.07
Col17a1Q07563 Gm25901-201ENSMUST00000158494 130 ntBASIC2.12□□□□□ -2.07
Col17a1Q07563 Gm24226-201ENSMUST00000158826 97 ntBASIC2.12□□□□□ -2.07
Col17a1Q07563 Gm24331-201ENSMUST00000175099 67 ntBASIC2.12□□□□□ -2.07
Col17a1Q07563 Mir3064-201ENSMUST00000175532 67 ntBASIC2.12□□□□□ -2.07
Col17a1Q07563 Gm23801-201ENSMUST00000175561 67 ntBASIC2.12□□□□□ -2.07
Col17a1Q07563 Gm24485-201ENSMUST00000178283 67 ntBASIC2.12□□□□□ -2.07
Col17a1Q07563 Gm19855-201ENSMUST00000210145 249 ntBASIC2.12□□□□□ -2.07
Col17a1Q07563 Mir451a-201ENSMUST00000093557 72 ntBASIC2.12□□□□□ -2.07
Col17a1Q07563 Gm27419-201ENSMUST00000184576 109 ntBASIC2.11□□□□□ -2.07
Col17a1Q07563 Mir490-201ENSMUST00000093567 84 ntBASIC2.11□□□□□ -2.07
Col17a1Q07563 Gm5581-201ENSMUST00000072940 2550 ntBASIC2.11□□□□□ -2.07
Col17a1Q07563 Gm22078-201ENSMUST00000157593 103 ntBASIC2.1□□□□□ -2.07
Col17a1Q07563 Gm23854-201ENSMUST00000158378 108 ntBASIC2.1□□□□□ -2.07
Col17a1Q07563 Gm22888-201ENSMUST00000158640 77 ntBASIC2.1□□□□□ -2.07
Col17a1Q07563 Gm27511-201ENSMUST00000183502 127 ntBASIC2.1□□□□□ -2.07
Col17a1Q07563 Mir6390-201ENSMUST00000184405 129 ntBASIC2.1□□□□□ -2.07
Col17a1Q07563 Gm3724-201ENSMUST00000197957 349 ntBASIC2.1□□□□□ -2.07
Col17a1Q07563 AC211878.4-201ENSMUST00000220970 262 ntBASIC2.1□□□□□ -2.07
Col17a1Q07563 AC122769.2-201ENSMUST00000227248 302 ntBASIC2.1□□□□□ -2.07
Col17a1Q07563 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Col17a1Q07563 Gm22768-201ENSMUST00000158366 153 ntBASIC2.09□□□□□ -2.07
Col17a1Q07563 Gm25870-201ENSMUST00000179845 79 ntBASIC2.09□□□□□ -2.07
Col17a1Q07563 Mir3961-201ENSMUST00000198795 59 ntBASIC2.09□□□□□ -2.07
Col17a1Q07563 Gm24201-201ENSMUST00000082946 125 ntBASIC2.09□□□□□ -2.07
Col17a1Q07563 Gm22743-201ENSMUST00000083445 133 ntBASIC2.09□□□□□ -2.07
Col17a1Q07563 Gm25611-201ENSMUST00000104017 133 ntBASIC2.08□□□□□ -2.08
Col17a1Q07563 Gm26257-201ENSMUST00000122500 107 ntBASIC2.08□□□□□ -2.08
Col17a1Q07563 Gm15654-201ENSMUST00000152660 300 ntBASIC2.08□□□□□ -2.08
Col17a1Q07563 Gm25964-201ENSMUST00000157171 97 ntBASIC2.08□□□□□ -2.08
Col17a1Q07563 Gm23856-201ENSMUST00000158380 99 ntBASIC2.08□□□□□ -2.08
Col17a1Q07563 Gm27878-201ENSMUST00000184000 106 ntBASIC2.08□□□□□ -2.08
Col17a1Q07563 Gm27248-201ENSMUST00000184004 166 ntBASIC2.08□□□□□ -2.08
Col17a1Q07563 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
Col17a1Q07563 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Col17a1Q07563 Gm25541-201ENSMUST00000116888 126 ntBASIC2.07□□□□□ -2.08
Col17a1Q07563 Gm23477-201ENSMUST00000158882 128 ntBASIC2.07□□□□□ -2.08
Col17a1Q07563 Gm26290-201ENSMUST00000158891 145 ntBASIC2.07□□□□□ -2.08
Col17a1Q07563 Mir6351-201ENSMUST00000183826 99 ntBASIC2.07□□□□□ -2.08
Col17a1Q07563 Gm28435-201ENSMUST00000185496 108 ntBASIC2.07□□□□□ -2.08
Col17a1Q07563 Gm29047-201ENSMUST00000189816 108 ntBASIC2.07□□□□□ -2.08
Col17a1Q07563 Gm25357-201ENSMUST00000082745 72 ntBASIC2.07□□□□□ -2.08
Col17a1Q07563 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC2.07□□□□□ -2.08
Col17a1Q07563 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Col17a1Q07563 Gm24399-201ENSMUST00000157869 74 ntBASIC2.07□□□□□ -2.08
Col17a1Q07563 Gm25300-201ENSMUST00000175284 84 ntBASIC2.07□□□□□ -2.08
Col17a1Q07563 Gm25014-201ENSMUST00000158401 103 ntBASIC2.06□□□□□ -2.08
Col17a1Q07563 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC2.06□□□□□ -2.08
Col17a1Q07563 Gm24668-201ENSMUST00000158935 104 ntBASIC2.05□□□□□ -2.08
Col17a1Q07563 Gm23370-201ENSMUST00000199545 130 ntBASIC2.05□□□□□ -2.08
Col17a1Q07563 Gm45754-201ENSMUST00000212380 279 ntBASIC2.05□□□□□ -2.08
Col17a1Q07563 AC164612.2-202ENSMUST00000216314 253 ntBASIC2.05□□□□□ -2.08
Col17a1Q07563 AC154506.4-201ENSMUST00000224898 3416 ntBASIC2.04□□□□□ -2.08
Col17a1Q07563 Gm22603-201ENSMUST00000157603 96 ntBASIC2.04□□□□□ -2.08
Col17a1Q07563 Gm45197-201ENSMUST00000205288 151 ntBASIC2.04□□□□□ -2.08
Col17a1Q07563 Gm22386-201ENSMUST00000158192 129 ntBASIC2.03□□□□□ -2.08
Col17a1Q07563 Gm24222-201ENSMUST00000158834 93 ntBASIC2.03□□□□□ -2.08
Col17a1Q07563 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC2.03□□□□□ -2.08
Col17a1Q07563 Gm25011-201ENSMUST00000158398 126 ntBASIC2.02□□□□□ -2.09
Col17a1Q07563 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.02□□□□□ -2.09
Col17a1Q07563 Gm25241-201ENSMUST00000174909 84 ntBASIC2.01□□□□□ -2.09
Col17a1Q07563 Gm26217-201ENSMUST00000175212 84 ntBASIC2.01□□□□□ -2.09
Col17a1Q07563 Mir30f-201ENSMUST00000196073 92 ntBASIC2.01□□□□□ -2.09
Col17a1Q07563 Mir429-201ENSMUST00000083493 83 ntBASIC2.01□□□□□ -2.09
Col17a1Q07563 Mir141-201ENSMUST00000083540 72 ntBASIC2.01□□□□□ -2.09
Col17a1Q07563 Mir20b-201ENSMUST00000102087 80 ntBASIC2.01□□□□□ -2.09
Col17a1Q07563 Gm23375-201ENSMUST00000175407 83 ntBASIC2.01□□□□□ -2.09
Col17a1Q07563 Gm22413-201ENSMUST00000175465 85 ntBASIC2.01□□□□□ -2.09
Col17a1Q07563 Gm21885-201ENSMUST00000178891 327 ntBASIC2.01□□□□□ -2.09
Col17a1Q07563 Mir6369-201ENSMUST00000183772 106 ntBASIC2.01□□□□□ -2.09
Col17a1Q07563 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC2.01□□□□□ -2.09
Col17a1Q07563 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC2.01□□□□□ -2.09
Col17a1Q07563 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC2.01□□□□□ -2.09
Col17a1Q07563 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC2.01□□□□□ -2.09
Col17a1Q07563 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC2.01□□□□□ -2.09
Col17a1Q07563 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC2.01□□□□□ -2.09
Col17a1Q07563 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC2.01□□□□□ -2.09
Col17a1Q07563 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC2.01□□□□□ -2.09
Col17a1Q07563 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC2.01□□□□□ -2.09
Col17a1Q07563 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC2.01□□□□□ -2.09
Col17a1Q07563 Mir7215-201ENSMUST00000200383 51 ntBASIC2.01□□□□□ -2.09
Col17a1Q07563 Gm12469-201ENSMUST00000117623 207 ntBASIC2□□□□□ -2.09
Col17a1Q07563 AC157278.1-201ENSMUST00000221621 148 ntBASIC2□□□□□ -2.09
Col17a1Q07563 Gm6109-201ENSMUST00000223297 348 ntBASIC2□□□□□ -2.09
Col17a1Q07563 Mir211-201ENSMUST00000083651 106 ntBASIC2□□□□□ -2.09
Col17a1Q07563 Gm25992-201ENSMUST00000102437 109 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 166.5 ms