Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.6□□□□□ -1.35
HMGCS2P54868 AC006511.3-201ENST00000624929 1783 ntBASIC6.6□□□□□ -1.35
HMGCS2P54868 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HMGCS2P54868 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
HMGCS2P54868 RNA5SP183-201ENST00000362452 119 ntBASIC6.6□□□□□ -1.35
HMGCS2P54868 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC6.6□□□□□ -1.35
HMGCS2P54868 RN7SKP273-201ENST00000411392 314 ntBASIC6.6□□□□□ -1.35
HMGCS2P54868 RPS27P18-201ENST00000431701 247 ntBASIC6.6□□□□□ -1.35
HMGCS2P54868 OTX2P1-201ENST00000450956 354 ntBASIC6.6□□□□□ -1.35
HMGCS2P54868 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC6.6□□□□□ -1.35
HMGCS2P54868 RPL7P45-201ENST00000455851 743 ntBASIC6.6□□□□□ -1.35
HMGCS2P54868 AC079841.1-201ENST00000481228 950 ntBASIC6.6□□□□□ -1.35
HMGCS2P54868 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HMGCS2P54868 PGAM1P13-201ENST00000507497 754 ntBASIC6.6□□□□□ -1.35
HMGCS2P54868 AC105384.2-201ENST00000508433 640 ntBASIC6.6□□□□□ -1.35
HMGCS2P54868 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC6.6□□□□□ -1.35
HMGCS2P54868 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC6.6□□□□□ -1.35
HMGCS2P54868 DPPA3P2-202ENST00000557188 1219 ntBASIC6.6□□□□□ -1.35
HMGCS2P54868 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC6.6□□□□□ -1.35
HMGCS2P54868 MIR4700-201ENST00000578311 74 ntBASIC6.6□□□□□ -1.35
HMGCS2P54868 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC6.6□□□□□ -1.35
HMGCS2P54868 AL445222.1-201ENST00000607259 628 ntBASIC6.6□□□□□ -1.35
HMGCS2P54868 RPSAP73-201ENST00000614820 330 ntBASIC6.6□□□□□ -1.35
HMGCS2P54868 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.6□□□□□ -1.35
HMGCS2P54868 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC6.6□□□□□ -1.35
HMGCS2P54868 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HMGCS2P54868 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HMGCS2P54868 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
HMGCS2P54868 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
HMGCS2P54868 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
HMGCS2P54868 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HMGCS2P54868 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
HMGCS2P54868 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
HMGCS2P54868 AL731532.1-201ENST00000623972 4236 ntBASIC6.6□□□□□ -1.35
HMGCS2P54868 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HMGCS2P54868 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HMGCS2P54868 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
HMGCS2P54868 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.35
HMGCS2P54868 AC087516.1-201ENST00000561236 2428 ntBASIC6.59□□□□□ -1.35
HMGCS2P54868 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC6.59□□□□□ -1.35
HMGCS2P54868 AC009779.8-201ENST00000641684 4384 ntBASIC6.59□□□□□ -1.35
HMGCS2P54868 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
HMGCS2P54868 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.59□□□□□ -1.35
HMGCS2P54868 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
HMGCS2P54868 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.59□□□□□ -1.35
HMGCS2P54868 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
HMGCS2P54868 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.35
HMGCS2P54868 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC6.59□□□□□ -1.35
HMGCS2P54868 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
HMGCS2P54868 MIR130A-201ENST00000385274 89 ntBASIC6.59□□□□□ -1.35
HMGCS2P54868 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
HMGCS2P54868 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC6.59□□□□□ -1.35
HMGCS2P54868 SLC35E1P1-201ENST00000419313 864 ntBASIC6.59□□□□□ -1.35
HMGCS2P54868 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC6.59□□□□□ -1.35
HMGCS2P54868 SERPINA7P1-201ENST00000443077 631 ntBASIC6.59□□□□□ -1.35
HMGCS2P54868 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.59□□□□□ -1.35
HMGCS2P54868 RPS26P41-201ENST00000450370 284 ntBASIC6.59□□□□□ -1.35
HMGCS2P54868 AURKAPS1-201ENST00000451805 1212 ntBASIC6.59□□□□□ -1.35
HMGCS2P54868 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC6.59□□□□□ -1.35
HMGCS2P54868 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC6.59□□□□□ -1.35
HMGCS2P54868 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.59□□□□□ -1.35
HMGCS2P54868 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC6.59□□□□□ -1.35
HMGCS2P54868 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC6.59□□□□□ -1.35
HMGCS2P54868 RN7SL808P-201ENST00000496066 299 ntBASIC6.59□□□□□ -1.35
HMGCS2P54868 AC072052.1-201ENST00000496556 306 ntBASIC6.59□□□□□ -1.35
HMGCS2P54868 AC253576.1-201ENST00000511645 1156 ntBASIC6.59□□□□□ -1.35
HMGCS2P54868 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.59□□□□□ -1.35
HMGCS2P54868 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.59□□□□□ -1.35
HMGCS2P54868 OR4A46P-201ENST00000527255 933 ntBASIC6.59□□□□□ -1.35
HMGCS2P54868 AC090424.1-201ENST00000535243 736 ntBASIC6.59□□□□□ -1.35
HMGCS2P54868 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.59□□□□□ -1.35
HMGCS2P54868 AC244502.2-201ENST00000543361 851 ntBASIC6.59□□□□□ -1.35
HMGCS2P54868 AL049779.2-201ENST00000553847 315 ntBASIC6.59□□□□□ -1.35
HMGCS2P54868 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC6.59□□□□□ -1.35
HMGCS2P54868 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.59□□□□□ -1.35
HMGCS2P54868 AC007346.2-201ENST00000564816 892 ntBASIC6.59□□□□□ -1.35
HMGCS2P54868 AC012616.1-201ENST00000600294 197 ntBASIC6.59□□□□□ -1.35
HMGCS2P54868 AC024940.4-201ENST00000605507 246 ntBASIC6.59□□□□□ -1.35
HMGCS2P54868 AL137246.2-201ENST00000613439 662 ntBASIC6.59□□□□□ -1.35
HMGCS2P54868 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
HMGCS2P54868 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC6.59□□□□□ -1.35
HMGCS2P54868 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.59□□□□□ -1.35
HMGCS2P54868 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
HMGCS2P54868 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.36
HMGCS2P54868 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
HMGCS2P54868 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.58□□□□□ -1.36
HMGCS2P54868 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HMGCS2P54868 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HMGCS2P54868 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HMGCS2P54868 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
HMGCS2P54868 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HMGCS2P54868 RNA5SP507-201ENST00000363603 121 ntBASIC6.58□□□□□ -1.36
HMGCS2P54868 AL645927.1-201ENST00000396783 406 ntBASIC6.58□□□□□ -1.36
HMGCS2P54868 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC6.58□□□□□ -1.36
HMGCS2P54868 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC6.58□□□□□ -1.36
HMGCS2P54868 AL355032.1-201ENST00000472981 438 ntBASIC6.58□□□□□ -1.36
HMGCS2P54868 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC6.58□□□□□ -1.36
HMGCS2P54868 AL035690.1-201ENST00000490892 383 ntBASIC6.58□□□□□ -1.36
HMGCS2P54868 DUTP1-201ENST00000493631 470 ntBASIC6.58□□□□□ -1.36
HMGCS2P54868 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms