Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
SNX9Q9Y5X1 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
SNX9Q9Y5X1 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC6.32□□□□□ -1.4
SNX9Q9Y5X1 AL451046.1-201ENST00000406097 534 ntBASIC6.32□□□□□ -1.4
SNX9Q9Y5X1 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.32□□□□□ -1.4
SNX9Q9Y5X1 RPS29P14-201ENST00000431518 171 ntBASIC6.32□□□□□ -1.4
SNX9Q9Y5X1 RPS12P17-201ENST00000438591 377 ntBASIC6.32□□□□□ -1.4
SNX9Q9Y5X1 AP006222.1-205ENST00000450734 457 ntBASIC6.32□□□□□ -1.4
SNX9Q9Y5X1 AL603882.1-201ENST00000463059 681 ntBASIC6.32□□□□□ -1.4
SNX9Q9Y5X1 GAPDHP71-201ENST00000511530 1003 ntBASIC6.32□□□□□ -1.4
SNX9Q9Y5X1 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.32□□□□□ -1.4
SNX9Q9Y5X1 AC008429.4-201ENST00000521201 182 ntBASIC6.32□□□□□ -1.4
SNX9Q9Y5X1 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.32□□□□□ -1.4
SNX9Q9Y5X1 AP000648.1-201ENST00000529682 397 ntBASIC6.32□□□□□ -1.4
SNX9Q9Y5X1 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.32□□□□□ -1.4
SNX9Q9Y5X1 ZNF322P1-201ENST00000568013 1209 ntBASIC6.32□□□□□ -1.4
SNX9Q9Y5X1 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC6.32□□□□□ -1.4
SNX9Q9Y5X1 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC6.32□□□□□ -1.4
SNX9Q9Y5X1 COX6CP7-201ENST00000597056 208 ntBASIC6.32□□□□□ -1.4
SNX9Q9Y5X1 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.32□□□□□ -1.4
SNX9Q9Y5X1 AL031601.1-201ENST00000605702 394 ntBASIC6.32□□□□□ -1.4
SNX9Q9Y5X1 AC145423.1-201ENST00000605712 336 ntBASIC6.32□□□□□ -1.4
SNX9Q9Y5X1 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC6.32□□□□□ -1.4
SNX9Q9Y5X1 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC6.32□□□□□ -1.4
SNX9Q9Y5X1 AL139099.4-201ENST00000614802 114 ntBASIC6.32□□□□□ -1.4
SNX9Q9Y5X1 OR11H2-202ENST00000641517 1085 ntBASIC6.32□□□□□ -1.4
SNX9Q9Y5X1 OR8G3P-202ENST00000641572 1255 ntBASIC6.32□□□□□ -1.4
SNX9Q9Y5X1 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
SNX9Q9Y5X1 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
SNX9Q9Y5X1 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SNX9Q9Y5X1 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
SNX9Q9Y5X1 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SNX9Q9Y5X1 AC012078.1-201ENST00000405035 1646 ntBASIC6.32□□□□□ -1.4
SNX9Q9Y5X1 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SNX9Q9Y5X1 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.32□□□□□ -1.4
SNX9Q9Y5X1 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.32□□□□□ -1.4
SNX9Q9Y5X1 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
SNX9Q9Y5X1 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SNX9Q9Y5X1 AC022164.1-201ENST00000568767 2673 ntBASIC6.32□□□□□ -1.4
SNX9Q9Y5X1 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
SNX9Q9Y5X1 NEPNP-201ENST00000404786 1371 ntBASIC6.31□□□□□ -1.4
SNX9Q9Y5X1 NLRP3P1-201ENST00000622303 1785 ntBASIC6.31□□□□□ -1.4
SNX9Q9Y5X1 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SNX9Q9Y5X1 AC123769.1-201ENST00000530992 3192 ntBASIC6.31□□□□□ -1.4
SNX9Q9Y5X1 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.31□□□□□ -1.4
SNX9Q9Y5X1 AC232271.1-201ENST00000602455 2715 ntBASIC6.31□□□□□ -1.4
SNX9Q9Y5X1 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.31□□□□□ -1.4
SNX9Q9Y5X1 AL161912.4-201ENST00000623889 2468 ntBASIC6.31□□□□□ -1.4
SNX9Q9Y5X1 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SNX9Q9Y5X1 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
SNX9Q9Y5X1 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SNX9Q9Y5X1 RNA5SP500-201ENST00000364486 119 ntBASIC6.31□□□□□ -1.4
SNX9Q9Y5X1 AL121835.1-201ENST00000404250 354 ntBASIC6.31□□□□□ -1.4
SNX9Q9Y5X1 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
SNX9Q9Y5X1 AC245060.4-201ENST00000413293 1121 ntBASIC6.31□□□□□ -1.4
SNX9Q9Y5X1 AC244453.4-201ENST00000419150 388 ntBASIC6.31□□□□□ -1.4
SNX9Q9Y5X1 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC6.31□□□□□ -1.4
SNX9Q9Y5X1 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.31□□□□□ -1.4
SNX9Q9Y5X1 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SNX9Q9Y5X1 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC6.31□□□□□ -1.4
SNX9Q9Y5X1 AL512637.1-201ENST00000439523 1231 ntBASIC6.31□□□□□ -1.4
SNX9Q9Y5X1 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC6.31□□□□□ -1.4
SNX9Q9Y5X1 AC073109.1-201ENST00000445066 978 ntBASIC6.31□□□□□ -1.4
SNX9Q9Y5X1 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.31□□□□□ -1.4
SNX9Q9Y5X1 OR7L1P-201ENST00000456181 380 ntBASIC6.31□□□□□ -1.4
SNX9Q9Y5X1 SLC25A51P1-201ENST00000468432 871 ntBASIC6.31□□□□□ -1.4
SNX9Q9Y5X1 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.31□□□□□ -1.4
SNX9Q9Y5X1 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.31□□□□□ -1.4
SNX9Q9Y5X1 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.31□□□□□ -1.4
SNX9Q9Y5X1 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC6.31□□□□□ -1.4
SNX9Q9Y5X1 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC6.31□□□□□ -1.4
SNX9Q9Y5X1 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
SNX9Q9Y5X1 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.31□□□□□ -1.4
SNX9Q9Y5X1 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.31□□□□□ -1.4
SNX9Q9Y5X1 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
SNX9Q9Y5X1 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC6.31□□□□□ -1.4
SNX9Q9Y5X1 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC6.31□□□□□ -1.4
SNX9Q9Y5X1 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.31□□□□□ -1.4
SNX9Q9Y5X1 AC006213.4-201ENST00000616184 634 ntBASIC6.31□□□□□ -1.4
SNX9Q9Y5X1 AL445670.1-201ENST00000618889 801 ntBASIC6.31□□□□□ -1.4
SNX9Q9Y5X1 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC6.31□□□□□ -1.4
SNX9Q9Y5X1 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC6.31□□□□□ -1.4
SNX9Q9Y5X1 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC6.31□□□□□ -1.4
SNX9Q9Y5X1 AL591135.1-201ENST00000401578 5914 ntBASIC6.31□□□□□ -1.4
SNX9Q9Y5X1 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SNX9Q9Y5X1 AC020656.2-201ENST00000613291 5309 ntBASIC6.31□□□□□ -1.4
SNX9Q9Y5X1 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SNX9Q9Y5X1 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SNX9Q9Y5X1 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SNX9Q9Y5X1 AC114876.1-201ENST00000490962 1366 ntBASIC6.31□□□□□ -1.4
SNX9Q9Y5X1 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.3□□□□□ -1.4
SNX9Q9Y5X1 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.3□□□□□ -1.4
SNX9Q9Y5X1 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SNX9Q9Y5X1 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
SNX9Q9Y5X1 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.3□□□□□ -1.4
SNX9Q9Y5X1 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.3□□□□□ -1.4
SNX9Q9Y5X1 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.3□□□□□ -1.4
SNX9Q9Y5X1 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
SNX9Q9Y5X1 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SNX9Q9Y5X1 NACAP7-201ENST00000407371 609 ntBASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 255 ms