Protein–RNA interactions for Protein: Q6P7W2

Shkbp1, SH3KBP1-binding protein 1, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1Q6P7W2 Gm23172-201ENSMUST00000157160 124 ntBASIC1.58□□□□□ -2.16
Shkbp1Q6P7W2 Gm23122-201ENSMUST00000157645 103 ntBASIC1.58□□□□□ -2.16
Shkbp1Q6P7W2 Gm24223-201ENSMUST00000158827 90 ntBASIC1.58□□□□□ -2.16
Shkbp1Q6P7W2 Gm22887-201ENSMUST00000178586 107 ntBASIC1.58□□□□□ -2.16
Shkbp1Q6P7W2 Gm25229-201ENSMUST00000178587 79 ntBASIC1.58□□□□□ -2.16
Shkbp1Q6P7W2 Gm27511-201ENSMUST00000183502 127 ntBASIC1.58□□□□□ -2.16
Shkbp1Q6P7W2 Gm27493-201ENSMUST00000184128 78 ntBASIC1.58□□□□□ -2.16
Shkbp1Q6P7W2 AC122769.2-201ENSMUST00000227248 302 ntBASIC1.58□□□□□ -2.16
Shkbp1Q6P7W2 Gm23100-201ENSMUST00000083455 141 ntBASIC1.58□□□□□ -2.16
Shkbp1Q6P7W2 Gm44560-201ENSMUST00000207816 3115 ntBASIC1.58□□□□□ -2.16
Shkbp1Q6P7W2 Gm25068-201ENSMUST00000103895 110 ntBASIC1.57□□□□□ -2.16
Shkbp1Q6P7W2 Gm23336-201ENSMUST00000117023 123 ntBASIC1.57□□□□□ -2.16
Shkbp1Q6P7W2 U6.1-201ENSMUST00000157443 101 ntBASIC1.57□□□□□ -2.16
Shkbp1Q6P7W2 Gm22386-201ENSMUST00000158192 129 ntBASIC1.57□□□□□ -2.16
Shkbp1Q6P7W2 Gm23763-201ENSMUST00000158345 60 ntBASIC1.57□□□□□ -2.16
Shkbp1Q6P7W2 Gm22914-201ENSMUST00000175195 77 ntBASIC1.57□□□□□ -2.16
Shkbp1Q6P7W2 Gm27639-201ENSMUST00000184937 85 ntBASIC1.57□□□□□ -2.16
Shkbp1Q6P7W2 Gm24203-201ENSMUST00000082949 114 ntBASIC1.57□□□□□ -2.16
Shkbp1Q6P7W2 Gm14884-201ENSMUST00000120456 196 ntBASIC1.56□□□□□ -2.16
Shkbp1Q6P7W2 Gm24593-201ENSMUST00000122507 106 ntBASIC1.56□□□□□ -2.16
Shkbp1Q6P7W2 Gm25423-201ENSMUST00000157609 107 ntBASIC1.56□□□□□ -2.16
Shkbp1Q6P7W2 Gm25014-201ENSMUST00000158401 103 ntBASIC1.56□□□□□ -2.16
Shkbp1Q6P7W2 Gm22140-201ENSMUST00000158745 120 ntBASIC1.56□□□□□ -2.16
Shkbp1Q6P7W2 Mir7665-201ENSMUST00000184907 63 ntBASIC1.56□□□□□ -2.16
Shkbp1Q6P7W2 Gm28767-201ENSMUST00000188601 114 ntBASIC1.56□□□□□ -2.16
Shkbp1Q6P7W2 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.56□□□□□ -2.16
Shkbp1Q6P7W2 Gm3702-201ENSMUST00000211754 346 ntBASIC1.56□□□□□ -2.16
Shkbp1Q6P7W2 Gm25635-201ENSMUST00000082675 131 ntBASIC1.56□□□□□ -2.16
Shkbp1Q6P7W2 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Shkbp1Q6P7W2 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
Shkbp1Q6P7W2 Mir1191-201ENSMUST00000116883 120 ntBASIC1.55□□□□□ -2.16
Shkbp1Q6P7W2 Gm22603-201ENSMUST00000157603 96 ntBASIC1.55□□□□□ -2.16
Shkbp1Q6P7W2 Gm24401-201ENSMUST00000157868 91 ntBASIC1.55□□□□□ -2.16
Shkbp1Q6P7W2 Gm24399-201ENSMUST00000157869 74 ntBASIC1.55□□□□□ -2.16
Shkbp1Q6P7W2 Gm22944-201ENSMUST00000158662 133 ntBASIC1.55□□□□□ -2.16
Shkbp1Q6P7W2 Gm27248-201ENSMUST00000184004 166 ntBASIC1.55□□□□□ -2.16
Shkbp1Q6P7W2 Gm27365-201ENSMUST00000184041 177 ntBASIC1.55□□□□□ -2.16
Shkbp1Q6P7W2 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC1.55□□□□□ -2.16
Shkbp1Q6P7W2 Gm25696-201ENSMUST00000082900 105 ntBASIC1.55□□□□□ -2.16
Shkbp1Q6P7W2 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.54□□□□□ -2.16
Shkbp1Q6P7W2 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.54□□□□□ -2.16
Shkbp1Q6P7W2 Mir1950-201ENSMUST00000158526 74 ntBASIC1.54□□□□□ -2.16
Shkbp1Q6P7W2 Gm23419-201ENSMUST00000175523 84 ntBASIC1.54□□□□□ -2.16
Shkbp1Q6P7W2 Gm22802-201ENSMUST00000175621 89 ntBASIC1.54□□□□□ -2.16
Shkbp1Q6P7W2 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC1.53□□□□□ -2.16
Shkbp1Q6P7W2 Gm23766-201ENSMUST00000103894 80 ntBASIC1.53□□□□□ -2.16
Shkbp1Q6P7W2 Mir873a-201ENSMUST00000104863 77 ntBASIC1.53□□□□□ -2.16
Shkbp1Q6P7W2 Gm24183-201ENSMUST00000122572 93 ntBASIC1.53□□□□□ -2.16
Shkbp1Q6P7W2 Gm15692-201ENSMUST00000152173 352 ntBASIC1.53□□□□□ -2.16
Shkbp1Q6P7W2 Gm23900-201ENSMUST00000157569 108 ntBASIC1.53□□□□□ -2.16
Shkbp1Q6P7W2 Gm22540-201ENSMUST00000158168 117 ntBASIC1.53□□□□□ -2.16
Shkbp1Q6P7W2 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Shkbp1Q6P7W2 Gm25992-201ENSMUST00000102437 109 ntBASIC1.52□□□□□ -2.17
Shkbp1Q6P7W2 Mir544-201ENSMUST00000103813 78 ntBASIC1.52□□□□□ -2.17
Shkbp1Q6P7W2 Gm23528-201ENSMUST00000104571 132 ntBASIC1.52□□□□□ -2.17
Shkbp1Q6P7W2 Mir1187-201ENSMUST00000116936 122 ntBASIC1.52□□□□□ -2.17
Shkbp1Q6P7W2 Gm22205-201ENSMUST00000122655 71 ntBASIC1.52□□□□□ -2.17
Shkbp1Q6P7W2 Mir1899-201ENSMUST00000122798 96 ntBASIC1.52□□□□□ -2.17
Shkbp1Q6P7W2 Gm24222-201ENSMUST00000158834 93 ntBASIC1.52□□□□□ -2.17
Shkbp1Q6P7W2 Gm27975-201ENSMUST00000184400 101 ntBASIC1.52□□□□□ -2.17
Shkbp1Q6P7W2 Gm27686-201ENSMUST00000185123 91 ntBASIC1.52□□□□□ -2.17
Shkbp1Q6P7W2 Gm43911-201ENSMUST00000203097 76 ntBASIC1.52□□□□□ -2.17
Shkbp1Q6P7W2 Gm25061-201ENSMUST00000104665 107 ntBASIC1.51□□□□□ -2.17
Shkbp1Q6P7W2 Gm14923-201ENSMUST00000118270 155 ntBASIC1.51□□□□□ -2.17
Shkbp1Q6P7W2 Gm26133-201ENSMUST00000157363 100 ntBASIC1.51□□□□□ -2.17
Shkbp1Q6P7W2 Gm24728-201ENSMUST00000158226 125 ntBASIC1.51□□□□□ -2.17
Shkbp1Q6P7W2 Gm22929-201ENSMUST00000175517 107 ntBASIC1.51□□□□□ -2.17
Shkbp1Q6P7W2 Mir6351-201ENSMUST00000183826 99 ntBASIC1.51□□□□□ -2.17
Shkbp1Q6P7W2 Mir7675-201ENSMUST00000184262 58 ntBASIC1.51□□□□□ -2.17
Shkbp1Q6P7W2 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
Shkbp1Q6P7W2 Gm11694-201ENSMUST00000118637 159 ntBASIC1.5□□□□□ -2.17
Shkbp1Q6P7W2 Mir3098-201ENSMUST00000175416 87 ntBASIC1.5□□□□□ -2.17
Shkbp1Q6P7W2 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.5□□□□□ -2.17
Shkbp1Q6P7W2 Gm27415-201ENSMUST00000183720 95 ntBASIC1.5□□□□□ -2.17
Shkbp1Q6P7W2 Mir7241-201ENSMUST00000184532 64 ntBASIC1.5□□□□□ -2.17
Shkbp1Q6P7W2 Gm28862-201ENSMUST00000188246 163 ntBASIC1.5□□□□□ -2.17
Shkbp1Q6P7W2 Gm45197-201ENSMUST00000205288 151 ntBASIC1.5□□□□□ -2.17
Shkbp1Q6P7W2 Snord60-201ENSMUST00000082834 78 ntBASIC1.5□□□□□ -2.17
Shkbp1Q6P7W2 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Shkbp1Q6P7W2 Gm23482-201ENSMUST00000104172 122 ntBASIC1.49□□□□□ -2.17
Shkbp1Q6P7W2 n-R5s63-201ENSMUST00000122756 103 ntBASIC1.49□□□□□ -2.17
Shkbp1Q6P7W2 Gm23715-201ENSMUST00000157354 106 ntBASIC1.49□□□□□ -2.17
Shkbp1Q6P7W2 Gm23106-201ENSMUST00000157554 101 ntBASIC1.49□□□□□ -2.17
Shkbp1Q6P7W2 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Shkbp1Q6P7W2 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.49□□□□□ -2.17
Shkbp1Q6P7W2 Snord14a-201ENSMUST00000082807 87 ntBASIC1.49□□□□□ -2.17
Shkbp1Q6P7W2 Snord1a-201ENSMUST00000083160 74 ntBASIC1.49□□□□□ -2.17
Shkbp1Q6P7W2 Gm23881-201ENSMUST00000116872 66 ntBASIC1.48□□□□□ -2.17
Shkbp1Q6P7W2 Gm27265-201ENSMUST00000183559 77 ntBASIC1.48□□□□□ -2.17
Shkbp1Q6P7W2 Gm27894-201ENSMUST00000184177 92 ntBASIC1.48□□□□□ -2.17
Shkbp1Q6P7W2 Gm44602-201ENSMUST00000205948 132 ntBASIC1.48□□□□□ -2.17
Shkbp1Q6P7W2 Mir34c-201ENSMUST00000083653 77 ntBASIC1.48□□□□□ -2.17
Shkbp1Q6P7W2 Gm25629-201ENSMUST00000084001 107 ntBASIC1.48□□□□□ -2.17
Shkbp1Q6P7W2 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.48□□□□□ -2.17
Shkbp1Q6P7W2 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC1.47□□□□□ -2.17
Shkbp1Q6P7W2 Gm23170-201ENSMUST00000157158 106 ntBASIC1.47□□□□□ -2.17
Shkbp1Q6P7W2 Gm22732-201ENSMUST00000158093 121 ntBASIC1.47□□□□□ -2.17
Shkbp1Q6P7W2 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC1.47□□□□□ -2.17
Shkbp1Q6P7W2 Gm25035-201ENSMUST00000175414 77 ntBASIC1.47□□□□□ -2.17
Shkbp1Q6P7W2 Gm24674-201ENSMUST00000179194 104 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 141.9 ms