Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC6.39□□□□□ -1.39
TPM4P67936 SMIM12P1-201ENST00000603004 274 ntBASIC6.39□□□□□ -1.39
TPM4P67936 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC6.39□□□□□ -1.39
TPM4P67936 AL162574.1-201ENST00000615702 950 ntBASIC6.39□□□□□ -1.39
TPM4P67936 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC6.39□□□□□ -1.39
TPM4P67936 AC005261.6-201ENST00000623072 1387 ntBASIC6.39□□□□□ -1.39
TPM4P67936 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
TPM4P67936 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TPM4P67936 ALB-220ENST00000621628 1606 ntTSL 5 BASIC6.39□□□□□ -1.39
TPM4P67936 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.39□□□□□ -1.39
TPM4P67936 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.39□□□□□ -1.39
TPM4P67936 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TPM4P67936 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TPM4P67936 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TPM4P67936 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.39□□□□□ -1.39
TPM4P67936 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
TPM4P67936 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TPM4P67936 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC6.38□□□□□ -1.39
TPM4P67936 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TPM4P67936 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC6.38□□□□□ -1.39
TPM4P67936 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC6.38□□□□□ -1.39
TPM4P67936 RNA5SP431-201ENST00000410312 120 ntBASIC6.38□□□□□ -1.39
TPM4P67936 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.38□□□□□ -1.39
TPM4P67936 VN1R20P-201ENST00000425215 966 ntBASIC6.38□□□□□ -1.39
TPM4P67936 AC009784.1-201ENST00000426484 460 ntBASIC6.38□□□□□ -1.39
TPM4P67936 PSMD8P1-201ENST00000436275 769 ntBASIC6.38□□□□□ -1.39
TPM4P67936 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC6.38□□□□□ -1.39
TPM4P67936 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TPM4P67936 ATP5LP5-201ENST00000483050 299 ntBASIC6.38□□□□□ -1.39
TPM4P67936 AC012123.2-201ENST00000485809 248 ntBASIC6.38□□□□□ -1.39
TPM4P67936 RPS17P5-201ENST00000498293 408 ntBASIC6.38□□□□□ -1.39
TPM4P67936 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC6.38□□□□□ -1.39
TPM4P67936 AC093325.1-201ENST00000508378 326 ntBASIC6.38□□□□□ -1.39
TPM4P67936 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC6.38□□□□□ -1.39
TPM4P67936 ZNF519P4-201ENST00000514008 125 ntBASIC6.38□□□□□ -1.39
TPM4P67936 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC6.38□□□□□ -1.39
TPM4P67936 OOSP1P2-201ENST00000579644 351 ntBASIC6.38□□□□□ -1.39
TPM4P67936 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC6.38□□□□□ -1.39
TPM4P67936 U91328.4-201ENST00000608919 517 ntBASIC6.38□□□□□ -1.39
TPM4P67936 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC6.38□□□□□ -1.39
TPM4P67936 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC6.38□□□□□ -1.39
TPM4P67936 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
TPM4P67936 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TPM4P67936 AL603750.1-201ENST00000624216 1717 ntBASIC6.38□□□□□ -1.39
TPM4P67936 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC6.38□□□□□ -1.39
TPM4P67936 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
TPM4P67936 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
TPM4P67936 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TPM4P67936 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
TPM4P67936 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
TPM4P67936 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.37□□□□□ -1.39
TPM4P67936 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TPM4P67936 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
TPM4P67936 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC6.37□□□□□ -1.39
TPM4P67936 HSPA8P14-201ENST00000552265 1805 ntBASIC6.37□□□□□ -1.39
TPM4P67936 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC6.37□□□□□ -1.39
TPM4P67936 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.37□□□□□ -1.39
TPM4P67936 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TPM4P67936 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
TPM4P67936 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.37□□□□□ -1.39
TPM4P67936 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
TPM4P67936 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC6.37□□□□□ -1.39
TPM4P67936 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.37□□□□□ -1.39
TPM4P67936 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TPM4P67936 AC016739.1-201ENST00000405359 345 ntBASIC6.37□□□□□ -1.39
TPM4P67936 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.37□□□□□ -1.39
TPM4P67936 KIF4CP-201ENST00000422742 1279 ntBASIC6.37□□□□□ -1.39
TPM4P67936 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC6.37□□□□□ -1.39
TPM4P67936 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC6.37□□□□□ -1.39
TPM4P67936 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC6.37□□□□□ -1.39
TPM4P67936 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC6.37□□□□□ -1.39
TPM4P67936 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
TPM4P67936 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.37□□□□□ -1.39
TPM4P67936 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC6.37□□□□□ -1.39
TPM4P67936 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
TPM4P67936 NXT1P1-201ENST00000458481 316 ntBASIC6.37□□□□□ -1.39
TPM4P67936 AL157777.1-201ENST00000468100 304 ntBASIC6.37□□□□□ -1.39
TPM4P67936 RPS4XP17-201ENST00000479057 754 ntBASIC6.37□□□□□ -1.39
TPM4P67936 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC6.37□□□□□ -1.39
TPM4P67936 NPM1P21-201ENST00000513394 762 ntBASIC6.37□□□□□ -1.39
TPM4P67936 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC6.37□□□□□ -1.39
TPM4P67936 SLC25A51P2-201ENST00000535708 889 ntBASIC6.37□□□□□ -1.39
TPM4P67936 AC139697.1-201ENST00000548429 745 ntBASIC6.37□□□□□ -1.39
TPM4P67936 MRPS21P8-201ENST00000569196 235 ntBASIC6.37□□□□□ -1.39
TPM4P67936 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
TPM4P67936 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
TPM4P67936 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
TPM4P67936 MIR7853-201ENST00000584820 132 ntBASIC6.37□□□□□ -1.39
TPM4P67936 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.37□□□□□ -1.39
TPM4P67936 AC073333.2-201ENST00000603589 769 ntBASIC6.37□□□□□ -1.39
TPM4P67936 AC012368.3-201ENST00000604190 219 ntBASIC6.37□□□□□ -1.39
TPM4P67936 AC092944.2-201ENST00000605443 889 ntBASIC6.37□□□□□ -1.39
TPM4P67936 AC073389.3-201ENST00000609434 935 ntBASIC6.37□□□□□ -1.39
TPM4P67936 AL080312.2-201ENST00000613001 630 ntBASIC6.37□□□□□ -1.39
TPM4P67936 FAM27E2-201ENST00000619668 403 ntBASIC6.37□□□□□ -1.39
TPM4P67936 AC211486.4-201ENST00000621495 113 ntBASIC6.37□□□□□ -1.39
TPM4P67936 AC091059.2-201ENST00000623355 614 ntBASIC6.37□□□□□ -1.39
TPM4P67936 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
TPM4P67936 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TPM4P67936 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms