Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CMC4P56277 ICE2P1-201ENST00000512800 1849 ntBASIC4.35□□□□□ -1.71
CMC4P56277 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CMC4P56277 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CMC4P56277 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
CMC4P56277 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC4.34□□□□□ -1.71
CMC4P56277 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CMC4P56277 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
CMC4P56277 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CMC4P56277 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC4.34□□□□□ -1.71
CMC4P56277 DPY19L1P1-201ENST00000417811 2594 ntBASIC4.34□□□□□ -1.71
CMC4P56277 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CMC4P56277 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CMC4P56277 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
CMC4P56277 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CMC4P56277 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CMC4P56277 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
CMC4P56277 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
CMC4P56277 SELE-204ENST00000367776 3576 ntTSL 5 BASIC4.34□□□□□ -1.71
CMC4P56277 SELE-205ENST00000367777 3576 ntTSL 5 BASIC4.34□□□□□ -1.71
CMC4P56277 MIR375-201ENST00000362103 64 ntBASIC4.34□□□□□ -1.71
CMC4P56277 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CMC4P56277 AL121977.1-201ENST00000401636 979 ntBASIC4.34□□□□□ -1.71
CMC4P56277 LSM5-203ENST00000409782 649 ntTSL 5 BASIC4.34□□□□□ -1.71
CMC4P56277 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC4.34□□□□□ -1.71
CMC4P56277 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC4.34□□□□□ -1.71
CMC4P56277 RPS3AP38-201ENST00000435889 763 ntBASIC4.34□□□□□ -1.71
CMC4P56277 AC013410.1-201ENST00000436223 1232 ntBASIC4.34□□□□□ -1.71
CMC4P56277 NDUFS5P5-201ENST00000437256 321 ntBASIC4.34□□□□□ -1.71
CMC4P56277 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC4.34□□□□□ -1.71
CMC4P56277 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC4.34□□□□□ -1.71
CMC4P56277 SERPINA7P1-201ENST00000443077 631 ntBASIC4.34□□□□□ -1.71
CMC4P56277 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC4.34□□□□□ -1.71
CMC4P56277 OR7E116P-201ENST00000448529 957 ntBASIC4.34□□□□□ -1.71
CMC4P56277 AC093719.1-201ENST00000480427 441 ntBASIC4.34□□□□□ -1.71
CMC4P56277 B4GALNT2P1-201ENST00000508857 307 ntBASIC4.34□□□□□ -1.71
CMC4P56277 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC4.34□□□□□ -1.71
CMC4P56277 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC4.34□□□□□ -1.71
CMC4P56277 IGHVII-60-1-201ENST00000519079 256 ntBASIC4.34□□□□□ -1.71
CMC4P56277 AC078899.1-201ENST00000521432 1185 ntBASIC4.34□□□□□ -1.71
CMC4P56277 BCAS2P1-201ENST00000528022 632 ntBASIC4.34□□□□□ -1.71
CMC4P56277 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC4.34□□□□□ -1.71
CMC4P56277 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC4.34□□□□□ -1.71
CMC4P56277 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC4.34□□□□□ -1.71
CMC4P56277 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
CMC4P56277 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC4.34□□□□□ -1.71
CMC4P56277 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC4.34□□□□□ -1.71
CMC4P56277 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CMC4P56277 AL512356.3-201ENST00000623005 461 ntBASIC4.34□□□□□ -1.71
CMC4P56277 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC4.34□□□□□ -1.71
CMC4P56277 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC4.34□□□□□ -1.71
CMC4P56277 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
CMC4P56277 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC4.34□□□□□ -1.71
CMC4P56277 UGP2-232ENST00000640075 567 ntTSL 5 BASIC4.34□□□□□ -1.71
CMC4P56277 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC4.34□□□□□ -1.71
CMC4P56277 AC073342.2-201ENST00000595842 1800 ntBASIC4.34□□□□□ -1.71
CMC4P56277 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
CMC4P56277 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC4.34□□□□□ -1.71
CMC4P56277 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
CMC4P56277 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC4.34□□□□□ -1.71
CMC4P56277 AC005225.5-201ENST00000623547 2225 ntBASIC4.34□□□□□ -1.72
CMC4P56277 AL121768.1-201ENST00000613917 2544 ntBASIC4.34□□□□□ -1.72
CMC4P56277 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
CMC4P56277 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
CMC4P56277 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
CMC4P56277 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CMC4P56277 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC4.33□□□□□ -1.72
CMC4P56277 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CMC4P56277 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CMC4P56277 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CMC4P56277 AC005224.3-201ENST00000584683 2140 ntBASIC4.33□□□□□ -1.72
CMC4P56277 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC4.33□□□□□ -1.72
CMC4P56277 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
CMC4P56277 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CMC4P56277 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.33□□□□□ -1.72
CMC4P56277 ZNF101P1-201ENST00000435701 1720 ntBASIC4.33□□□□□ -1.72
CMC4P56277 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.33□□□□□ -1.72
CMC4P56277 BX284613.1-201ENST00000452221 1641 ntBASIC4.33□□□□□ -1.72
CMC4P56277 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CMC4P56277 OR56A4-201ENST00000330728 1209 ntBASIC4.33□□□□□ -1.72
CMC4P56277 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.33□□□□□ -1.72
CMC4P56277 OR7E25P-201ENST00000344844 931 ntBASIC4.33□□□□□ -1.72
CMC4P56277 RNA5SP273-201ENST00000362484 113 ntBASIC4.33□□□□□ -1.72
CMC4P56277 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.33□□□□□ -1.72
CMC4P56277 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.33□□□□□ -1.72
CMC4P56277 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CMC4P56277 MIR1282-201ENST00000408865 101 ntBASIC4.33□□□□□ -1.72
CMC4P56277 AC066692.1-201ENST00000421721 457 ntBASIC4.33□□□□□ -1.72
CMC4P56277 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC4.33□□□□□ -1.72
CMC4P56277 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC4.33□□□□□ -1.72
CMC4P56277 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC4.33□□□□□ -1.72
CMC4P56277 HMGN1P2-201ENST00000445197 310 ntBASIC4.33□□□□□ -1.72
CMC4P56277 HNRNPDLP2-201ENST00000455248 751 ntBASIC4.33□□□□□ -1.72
CMC4P56277 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC4.33□□□□□ -1.72
CMC4P56277 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CMC4P56277 AC006539.1-201ENST00000481419 501 ntBASIC4.33□□□□□ -1.72
CMC4P56277 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CMC4P56277 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC4.33□□□□□ -1.72
CMC4P56277 AC090568.1-201ENST00000509499 856 ntBASIC4.33□□□□□ -1.72
CMC4P56277 TOMM22P4-201ENST00000511318 336 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms