Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 RPL19P11-201ENST00000495944 589 ntBASIC6.16□□□□□ -1.42
VPS50Q96JG6 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC6.16□□□□□ -1.42
VPS50Q96JG6 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC6.16□□□□□ -1.42
VPS50Q96JG6 AC008429.2-201ENST00000523057 864 ntBASIC6.16□□□□□ -1.42
VPS50Q96JG6 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC6.16□□□□□ -1.42
VPS50Q96JG6 AC135983.3-201ENST00000528049 1226 ntBASIC6.16□□□□□ -1.42
VPS50Q96JG6 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC6.16□□□□□ -1.42
VPS50Q96JG6 AC104072.1-201ENST00000568817 668 ntBASIC6.16□□□□□ -1.42
VPS50Q96JG6 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.16□□□□□ -1.42
VPS50Q96JG6 AC027216.1-201ENST00000577726 685 ntBASIC6.16□□□□□ -1.42
VPS50Q96JG6 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC6.16□□□□□ -1.42
VPS50Q96JG6 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
VPS50Q96JG6 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.16□□□□□ -1.42
VPS50Q96JG6 AC245052.7-201ENST00000601161 359 ntBASIC6.16□□□□□ -1.42
VPS50Q96JG6 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.16□□□□□ -1.42
VPS50Q96JG6 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC6.16□□□□□ -1.42
VPS50Q96JG6 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC6.16□□□□□ -1.42
VPS50Q96JG6 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC6.16□□□□□ -1.42
VPS50Q96JG6 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
VPS50Q96JG6 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
VPS50Q96JG6 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.16□□□□□ -1.42
VPS50Q96JG6 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
VPS50Q96JG6 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.16□□□□□ -1.42
VPS50Q96JG6 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
VPS50Q96JG6 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.16□□□□□ -1.42
VPS50Q96JG6 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
VPS50Q96JG6 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
VPS50Q96JG6 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
VPS50Q96JG6 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
VPS50Q96JG6 AC068870.3-201ENST00000625077 2536 ntBASIC6.16□□□□□ -1.42
VPS50Q96JG6 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
VPS50Q96JG6 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
VPS50Q96JG6 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC6.15□□□□□ -1.42
VPS50Q96JG6 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.42
VPS50Q96JG6 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
VPS50Q96JG6 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
VPS50Q96JG6 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
VPS50Q96JG6 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
VPS50Q96JG6 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
VPS50Q96JG6 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
VPS50Q96JG6 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.15□□□□□ -1.42
VPS50Q96JG6 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
VPS50Q96JG6 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
VPS50Q96JG6 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
VPS50Q96JG6 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
VPS50Q96JG6 RNA5SP350-201ENST00000363298 111 ntBASIC6.15□□□□□ -1.42
VPS50Q96JG6 SNORA72.3-201ENST00000365074 132 ntBASIC6.15□□□□□ -1.42
VPS50Q96JG6 YWHAZP4-201ENST00000392459 708 ntBASIC6.15□□□□□ -1.42
VPS50Q96JG6 RAB5CP1-201ENST00000395972 580 ntBASIC6.15□□□□□ -1.42
VPS50Q96JG6 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC6.15□□□□□ -1.42
VPS50Q96JG6 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC6.15□□□□□ -1.42
VPS50Q96JG6 AC099782.1-201ENST00000425889 474 ntBASIC6.15□□□□□ -1.42
VPS50Q96JG6 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC6.15□□□□□ -1.42
VPS50Q96JG6 FGF12-202ENST00000430714 603 ntTSL 2 BASIC6.15□□□□□ -1.42
VPS50Q96JG6 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
VPS50Q96JG6 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
VPS50Q96JG6 AC097359.1-201ENST00000447946 463 ntBASIC6.15□□□□□ -1.42
VPS50Q96JG6 HMGN1P5-201ENST00000448591 263 ntBASIC6.15□□□□□ -1.42
VPS50Q96JG6 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC6.15□□□□□ -1.42
VPS50Q96JG6 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.15□□□□□ -1.42
VPS50Q96JG6 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
VPS50Q96JG6 TPT1P8-201ENST00000510120 555 ntBASIC6.15□□□□□ -1.42
VPS50Q96JG6 AC108103.1-201ENST00000511286 446 ntBASIC6.15□□□□□ -1.42
VPS50Q96JG6 AC112198.4-201ENST00000515450 351 ntBASIC6.15□□□□□ -1.42
VPS50Q96JG6 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC6.15□□□□□ -1.42
VPS50Q96JG6 VTA1P2-201ENST00000520205 911 ntBASIC6.15□□□□□ -1.42
VPS50Q96JG6 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
VPS50Q96JG6 AC073916.1-201ENST00000545095 130 ntBASIC6.15□□□□□ -1.42
VPS50Q96JG6 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC6.15□□□□□ -1.42
VPS50Q96JG6 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC6.15□□□□□ -1.42
VPS50Q96JG6 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC6.15□□□□□ -1.42
VPS50Q96JG6 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC6.15□□□□□ -1.42
VPS50Q96JG6 AC016839.1-201ENST00000578162 867 ntBASIC6.15□□□□□ -1.42
VPS50Q96JG6 AC026898.1-201ENST00000586404 571 ntBASIC6.15□□□□□ -1.42
VPS50Q96JG6 AC004805.3-201ENST00000603178 310 ntBASIC6.15□□□□□ -1.42
VPS50Q96JG6 BUB1P1-201ENST00000603541 607 ntBASIC6.15□□□□□ -1.42
VPS50Q96JG6 AL356986.1-201ENST00000604085 341 ntBASIC6.15□□□□□ -1.42
VPS50Q96JG6 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.15□□□□□ -1.42
VPS50Q96JG6 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC6.15□□□□□ -1.42
VPS50Q96JG6 AL356608.1-201ENST00000610034 820 ntBASIC6.15□□□□□ -1.42
VPS50Q96JG6 RNA5SP439-201ENST00000617595 124 ntBASIC6.15□□□□□ -1.42
VPS50Q96JG6 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.15□□□□□ -1.42
VPS50Q96JG6 AC079298.2-201ENST00000623885 459 ntBASIC6.15□□□□□ -1.42
VPS50Q96JG6 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC6.15□□□□□ -1.42
VPS50Q96JG6 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC6.15□□□□□ -1.42
VPS50Q96JG6 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
VPS50Q96JG6 AC093909.5-201ENST00000621839 1799 ntBASIC6.15□□□□□ -1.43
VPS50Q96JG6 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.15□□□□□ -1.43
VPS50Q96JG6 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.15□□□□□ -1.43
VPS50Q96JG6 AC005261.6-201ENST00000623072 1387 ntBASIC6.15□□□□□ -1.43
VPS50Q96JG6 AC125238.2-201ENST00000430003 1440 ntBASIC6.15□□□□□ -1.43
VPS50Q96JG6 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
VPS50Q96JG6 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC6.15□□□□□ -1.43
VPS50Q96JG6 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
VPS50Q96JG6 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
VPS50Q96JG6 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
VPS50Q96JG6 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
VPS50Q96JG6 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC6.14□□□□□ -1.43
VPS50Q96JG6 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC6.14□□□□□ -1.43
VPS50Q96JG6 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms