Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC2.16□□□□□ -2.06
Col6a1Q04857 Mir6419-201ENSMUST00000184784 113 ntBASIC2.16□□□□□ -2.06
Col6a1Q04857 Gm20118-201ENSMUST00000187207 162 ntBASIC2.16□□□□□ -2.06
Col6a1Q04857 Gm25038-201ENSMUST00000082928 130 ntBASIC2.16□□□□□ -2.06
Col6a1Q04857 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC2.15□□□□□ -2.06
Col6a1Q04857 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Col6a1Q04857 Mir8119-201ENSMUST00000183371 129 ntBASIC2.15□□□□□ -2.07
Col6a1Q04857 Gm28794-201ENSMUST00000185276 136 ntBASIC2.15□□□□□ -2.07
Col6a1Q04857 Mir30f-201ENSMUST00000196073 92 ntBASIC2.15□□□□□ -2.07
Col6a1Q04857 Mir221-201ENSMUST00000083488 95 ntBASIC2.15□□□□□ -2.07
Col6a1Q04857 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Col6a1Q04857 Gm26080-201ENSMUST00000104069 131 ntBASIC2.14□□□□□ -2.07
Col6a1Q04857 Gm24478-201ENSMUST00000157439 158 ntBASIC2.14□□□□□ -2.07
Col6a1Q04857 Gm22727-201ENSMUST00000158090 116 ntBASIC2.14□□□□□ -2.07
Col6a1Q04857 Gm27511-201ENSMUST00000183502 127 ntBASIC2.14□□□□□ -2.07
Col6a1Q04857 Gm23299-201ENSMUST00000082708 79 ntBASIC2.14□□□□□ -2.07
Col6a1Q04857 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Col6a1Q04857 Mir654-201ENSMUST00000104787 84 ntBASIC2.13□□□□□ -2.07
Col6a1Q04857 Gm26441-201ENSMUST00000082590 104 ntBASIC2.13□□□□□ -2.07
Col6a1Q04857 Gm23172-201ENSMUST00000157160 124 ntBASIC2.12□□□□□ -2.07
Col6a1Q04857 Gm23208-201ENSMUST00000158666 127 ntBASIC2.12□□□□□ -2.07
Col6a1Q04857 Gm24366-201ENSMUST00000175383 86 ntBASIC2.12□□□□□ -2.07
Col6a1Q04857 Mir9-3-201ENSMUST00000175497 90 ntBASIC2.12□□□□□ -2.07
Col6a1Q04857 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC2.12□□□□□ -2.07
Col6a1Q04857 AC141438.3-201ENSMUST00000215632 202 ntBASIC2.12□□□□□ -2.07
Col6a1Q04857 Gm24151-201ENSMUST00000082758 141 ntBASIC2.12□□□□□ -2.07
Col6a1Q04857 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Col6a1Q04857 Mir764-201ENSMUST00000103259 108 ntBASIC2.11□□□□□ -2.07
Col6a1Q04857 Gm24593-201ENSMUST00000122507 106 ntBASIC2.11□□□□□ -2.07
Col6a1Q04857 Gm23469-201ENSMUST00000157131 104 ntBASIC2.11□□□□□ -2.07
Col6a1Q04857 U6.1-201ENSMUST00000157443 101 ntBASIC2.11□□□□□ -2.07
Col6a1Q04857 Gm22200-201ENSMUST00000158614 67 ntBASIC2.11□□□□□ -2.07
Col6a1Q04857 Snora24-201ENSMUST00000174989 130 ntBASIC2.11□□□□□ -2.07
Col6a1Q04857 Gm23917-201ENSMUST00000175256 98 ntBASIC2.11□□□□□ -2.07
Col6a1Q04857 Mir7016-201ENSMUST00000184308 72 ntBASIC2.11□□□□□ -2.07
Col6a1Q04857 Gm20108-201ENSMUST00000219977 153 ntBASIC2.11□□□□□ -2.07
Col6a1Q04857 mt-Tn-201ENSMUST00000082399 71 ntBASIC2.11□□□□□ -2.07
Col6a1Q04857 Gm26062-201ENSMUST00000083379 107 ntBASIC2.11□□□□□ -2.07
Col6a1Q04857 Gm23344-201ENSMUST00000083818 68 ntBASIC2.11□□□□□ -2.07
Col6a1Q04857 Mir1950-201ENSMUST00000158526 74 ntBASIC2.1□□□□□ -2.07
Col6a1Q04857 Gm23342-201ENSMUST00000158958 115 ntBASIC2.1□□□□□ -2.07
Col6a1Q04857 Gm25618-201ENSMUST00000179484 107 ntBASIC2.1□□□□□ -2.07
Col6a1Q04857 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC2.1□□□□□ -2.07
Col6a1Q04857 Mir7683-201ENSMUST00000183842 61 ntBASIC2.1□□□□□ -2.07
Col6a1Q04857 Mir7678-201ENSMUST00000185076 71 ntBASIC2.1□□□□□ -2.07
Col6a1Q04857 Mir30c-2-201ENSMUST00000083633 84 ntBASIC2.1□□□□□ -2.07
Col6a1Q04857 Mir1a-1-201ENSMUST00000093635 77 ntBASIC2.1□□□□□ -2.07
Col6a1Q04857 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.1□□□□□ -2.07
Col6a1Q04857 Mir6237-201ENSMUST00000183808 91 ntBASIC2.09□□□□□ -2.07
Col6a1Q04857 AC144671.1-201ENSMUST00000215265 99 ntBASIC2.09□□□□□ -2.07
Col6a1Q04857 Mir30d-201ENSMUST00000083503 82 ntBASIC2.09□□□□□ -2.07
Col6a1Q04857 Gm24509-201ENSMUST00000157086 101 ntBASIC2.08□□□□□ -2.08
Col6a1Q04857 Gm25358-201ENSMUST00000157189 101 ntBASIC2.08□□□□□ -2.08
Col6a1Q04857 Trav5n-3-201ENSMUST00000164511 270 ntBASIC2.08□□□□□ -2.08
Col6a1Q04857 Gm27326-201ENSMUST00000183504 95 ntBASIC2.08□□□□□ -2.08
Col6a1Q04857 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Col6a1Q04857 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC2.08□□□□□ -2.08
Col6a1Q04857 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC2.07□□□□□ -2.08
Col6a1Q04857 Gm22761-201ENSMUST00000102278 96 ntBASIC2.07□□□□□ -2.08
Col6a1Q04857 Gm22673-201ENSMUST00000104415 131 ntBASIC2.07□□□□□ -2.08
Col6a1Q04857 Mir1187-201ENSMUST00000116936 122 ntBASIC2.07□□□□□ -2.08
Col6a1Q04857 Gm27686-201ENSMUST00000185123 91 ntBASIC2.07□□□□□ -2.08
Col6a1Q04857 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Col6a1Q04857 Gm22677-201ENSMUST00000116977 108 ntBASIC2.06□□□□□ -2.08
Col6a1Q04857 Gm24637-201ENSMUST00000158674 85 ntBASIC2.06□□□□□ -2.08
Col6a1Q04857 Gm27365-201ENSMUST00000184041 177 ntBASIC2.06□□□□□ -2.08
Col6a1Q04857 Gm27894-201ENSMUST00000184177 92 ntBASIC2.06□□□□□ -2.08
Col6a1Q04857 Mir7021-201ENSMUST00000197026 63 ntBASIC2.06□□□□□ -2.08
Col6a1Q04857 Mir34c-201ENSMUST00000083653 77 ntBASIC2.06□□□□□ -2.08
Col6a1Q04857 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Col6a1Q04857 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Col6a1Q04857 AC164629.4-201ENSMUST00000218505 3247 ntBASIC2.05□□□□□ -2.08
Col6a1Q04857 Gm25274-201ENSMUST00000104296 135 ntBASIC2.05□□□□□ -2.08
Col6a1Q04857 Gm16307-201ENSMUST00000161269 210 ntBASIC2.05□□□□□ -2.08
Col6a1Q04857 Mir5104-201ENSMUST00000175319 94 ntBASIC2.05□□□□□ -2.08
Col6a1Q04857 Gm25229-201ENSMUST00000178587 79 ntBASIC2.05□□□□□ -2.08
Col6a1Q04857 Mir6369-201ENSMUST00000183772 106 ntBASIC2.05□□□□□ -2.08
Col6a1Q04857 Gm27639-201ENSMUST00000184937 85 ntBASIC2.05□□□□□ -2.08
Col6a1Q04857 Gm28256-201ENSMUST00000188953 139 ntBASIC2.05□□□□□ -2.08
Col6a1Q04857 Gm28559-201ENSMUST00000190532 139 ntBASIC2.05□□□□□ -2.08
Col6a1Q04857 Gm43911-201ENSMUST00000203097 76 ntBASIC2.05□□□□□ -2.08
Col6a1Q04857 Gm14884-201ENSMUST00000120456 196 ntBASIC2.04□□□□□ -2.08
Col6a1Q04857 Gm22605-201ENSMUST00000158289 108 ntBASIC2.04□□□□□ -2.08
Col6a1Q04857 Mir3057-201ENSMUST00000175040 91 ntBASIC2.04□□□□□ -2.08
Col6a1Q04857 AC129085.5-201ENSMUST00000225468 400 ntBASIC2.04□□□□□ -2.08
Col6a1Q04857 Gm24575-201ENSMUST00000175502 77 ntBASIC2.03□□□□□ -2.08
Col6a1Q04857 AC122769.2-201ENSMUST00000227248 302 ntBASIC2.03□□□□□ -2.08
Col6a1Q04857 Gm24401-201ENSMUST00000157868 91 ntBASIC2.02□□□□□ -2.09
Col6a1Q04857 Gm22140-201ENSMUST00000158745 120 ntBASIC2.02□□□□□ -2.09
Col6a1Q04857 Gm24223-201ENSMUST00000158827 90 ntBASIC2.02□□□□□ -2.09
Col6a1Q04857 Gm22914-201ENSMUST00000175195 77 ntBASIC2.02□□□□□ -2.09
Col6a1Q04857 Gm25035-201ENSMUST00000175414 77 ntBASIC2.02□□□□□ -2.09
Col6a1Q04857 Gm3702-201ENSMUST00000211754 346 ntBASIC2.02□□□□□ -2.09
Col6a1Q04857 Gm26082-201ENSMUST00000104070 127 ntBASIC2.01□□□□□ -2.09
Col6a1Q04857 Gm25061-201ENSMUST00000104665 107 ntBASIC2.01□□□□□ -2.09
Col6a1Q04857 Gm14039-201ENSMUST00000118705 101 ntBASIC2.01□□□□□ -2.09
Col6a1Q04857 Gm23468-201ENSMUST00000157125 108 ntBASIC2.01□□□□□ -2.09
Col6a1Q04857 Mir6950-201ENSMUST00000184438 73 ntBASIC2.01□□□□□ -2.09
Col6a1Q04857 Gm27544-201ENSMUST00000185069 155 ntBASIC2.01□□□□□ -2.09
Col6a1Q04857 Gm44384-201ENSMUST00000200208 114 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 351 ms