Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC1.9□□□□□ -2.11
Msx2Q03358 Gm25740-201ENSMUST00000180247 107 ntBASIC1.9□□□□□ -2.11
Msx2Q03358 Gm27544-201ENSMUST00000185069 155 ntBASIC1.9□□□□□ -2.11
Msx2Q03358 Gm25820-202ENSMUST00000197479 128 ntBASIC1.9□□□□□ -2.11
Msx2Q03358 AC129085.5-201ENSMUST00000225468 400 ntBASIC1.9□□□□□ -2.11
Msx2Q03358 Gm25644-201ENSMUST00000083209 107 ntBASIC1.9□□□□□ -2.11
Msx2Q03358 Gm24984-201ENSMUST00000104454 133 ntBASIC1.89□□□□□ -2.11
Msx2Q03358 Gm22522-201ENSMUST00000158271 151 ntBASIC1.89□□□□□ -2.11
Msx2Q03358 Gm24770-201ENSMUST00000158505 92 ntBASIC1.89□□□□□ -2.11
Msx2Q03358 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.89□□□□□ -2.11
Msx2Q03358 Gm37602-201ENSMUST00000195187 3310 ntBASIC1.88□□□□□ -2.11
Msx2Q03358 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC1.88□□□□□ -2.11
Msx2Q03358 Gm14884-201ENSMUST00000120456 196 ntBASIC1.88□□□□□ -2.11
Msx2Q03358 Gm23172-201ENSMUST00000157160 124 ntBASIC1.88□□□□□ -2.11
Msx2Q03358 Gm24399-201ENSMUST00000157869 74 ntBASIC1.88□□□□□ -2.11
Msx2Q03358 Gm25014-201ENSMUST00000158401 103 ntBASIC1.88□□□□□ -2.11
Msx2Q03358 Gm24223-201ENSMUST00000158827 90 ntBASIC1.88□□□□□ -2.11
Msx2Q03358 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
Msx2Q03358 Scarna9-201ENSMUST00000104318 70 ntBASIC1.87□□□□□ -2.11
Msx2Q03358 Mir5104-201ENSMUST00000175319 94 ntBASIC1.87□□□□□ -2.11
Msx2Q03358 Mir7021-201ENSMUST00000197026 63 ntBASIC1.87□□□□□ -2.11
Msx2Q03358 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Msx2Q03358 Gm23551-201ENSMUST00000116852 121 ntBASIC1.86□□□□□ -2.11
Msx2Q03358 Gm25542-201ENSMUST00000116889 94 ntBASIC1.86□□□□□ -2.11
Msx2Q03358 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC1.86□□□□□ -2.11
Msx2Q03358 Gm15536-201ENSMUST00000121411 114 ntBASIC1.86□□□□□ -2.11
Msx2Q03358 Gm26478-201ENSMUST00000122611 133 ntBASIC1.86□□□□□ -2.11
Msx2Q03358 Gm25730-201ENSMUST00000178753 165 ntBASIC1.86□□□□□ -2.11
Msx2Q03358 Mir7009-201ENSMUST00000184519 64 ntBASIC1.86□□□□□ -2.11
Msx2Q03358 Gm27959-201ENSMUST00000185172 111 ntBASIC1.86□□□□□ -2.11
Msx2Q03358 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Msx2Q03358 Mir1191-201ENSMUST00000116883 120 ntBASIC1.85□□□□□ -2.11
Msx2Q03358 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Msx2Q03358 Gm26358-201ENSMUST00000158215 97 ntBASIC1.85□□□□□ -2.11
Msx2Q03358 Gm23763-201ENSMUST00000158345 60 ntBASIC1.85□□□□□ -2.11
Msx2Q03358 Gm23813-201ENSMUST00000175153 77 ntBASIC1.85□□□□□ -2.11
Msx2Q03358 Gm21885-201ENSMUST00000178891 327 ntBASIC1.85□□□□□ -2.11
Msx2Q03358 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Msx2Q03358 Gm22732-201ENSMUST00000158093 121 ntBASIC1.84□□□□□ -2.11
Msx2Q03358 Gm22403-201ENSMUST00000174919 84 ntBASIC1.84□□□□□ -2.11
Msx2Q03358 Gm5900-201ENSMUST00000179862 375 ntBASIC1.84□□□□□ -2.11
Msx2Q03358 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.84□□□□□ -2.11
Msx2Q03358 AC122335.1-201ENSMUST00000217587 175 ntBASIC1.84□□□□□ -2.11
Msx2Q03358 Gm25854-201ENSMUST00000082792 72 ntBASIC1.84□□□□□ -2.11
Msx2Q03358 Gm24162-201ENSMUST00000093665 102 ntBASIC1.84□□□□□ -2.11
Msx2Q03358 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Msx2Q03358 Gm25992-201ENSMUST00000102437 109 ntBASIC1.83□□□□□ -2.12
Msx2Q03358 Gm25322-201ENSMUST00000122556 104 ntBASIC1.83□□□□□ -2.12
Msx2Q03358 Gm24384-201ENSMUST00000122693 75 ntBASIC1.83□□□□□ -2.12
Msx2Q03358 Gm24064-201ENSMUST00000157486 106 ntBASIC1.83□□□□□ -2.12
Msx2Q03358 Gm23900-201ENSMUST00000157569 108 ntBASIC1.83□□□□□ -2.12
Msx2Q03358 Gm22264-201ENSMUST00000178200 107 ntBASIC1.83□□□□□ -2.12
Msx2Q03358 Gm27399-201ENSMUST00000184250 78 ntBASIC1.83□□□□□ -2.12
Msx2Q03358 Gm27517-201ENSMUST00000184347 236 ntBASIC1.83□□□□□ -2.12
Msx2Q03358 AC122769.2-201ENSMUST00000227248 302 ntBASIC1.83□□□□□ -2.12
Msx2Q03358 Mir5117-201ENSMUST00000083226 84 ntBASIC1.83□□□□□ -2.12
Msx2Q03358 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
Msx2Q03358 Gm22944-201ENSMUST00000158662 133 ntBASIC1.82□□□□□ -2.12
Msx2Q03358 Mir3061-201ENSMUST00000175129 91 ntBASIC1.82□□□□□ -2.12
Msx2Q03358 Mir6995-201ENSMUST00000183658 71 ntBASIC1.82□□□□□ -2.12
Msx2Q03358 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC1.82□□□□□ -2.12
Msx2Q03358 Gm45197-201ENSMUST00000205288 151 ntBASIC1.82□□□□□ -2.12
Msx2Q03358 Gm24478-201ENSMUST00000157439 158 ntBASIC1.81□□□□□ -2.12
Msx2Q03358 Gm27443-201ENSMUST00000184660 98 ntBASIC1.81□□□□□ -2.12
Msx2Q03358 Gm28767-201ENSMUST00000188601 114 ntBASIC1.81□□□□□ -2.12
Msx2Q03358 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC1.81□□□□□ -2.12
Msx2Q03358 Gm23100-201ENSMUST00000083455 141 ntBASIC1.81□□□□□ -2.12
Msx2Q03358 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Msx2Q03358 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Msx2Q03358 Gm11694-201ENSMUST00000118637 159 ntBASIC1.8□□□□□ -2.12
Msx2Q03358 Gm11333-201ENSMUST00000119479 148 ntBASIC1.8□□□□□ -2.12
Msx2Q03358 Gm26133-201ENSMUST00000157363 100 ntBASIC1.8□□□□□ -2.12
Msx2Q03358 Gm22727-201ENSMUST00000158090 116 ntBASIC1.8□□□□□ -2.12
Msx2Q03358 Gm22539-201ENSMUST00000158167 117 ntBASIC1.8□□□□□ -2.12
Msx2Q03358 Gm22887-201ENSMUST00000178586 107 ntBASIC1.8□□□□□ -2.12
Msx2Q03358 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Msx2Q03358 Gm25417-201ENSMUST00000104212 131 ntBASIC1.79□□□□□ -2.12
Msx2Q03358 Mir1899-201ENSMUST00000122798 96 ntBASIC1.79□□□□□ -2.12
Msx2Q03358 Gm24199-201ENSMUST00000157808 136 ntBASIC1.79□□□□□ -2.12
Msx2Q03358 Gm23761-201ENSMUST00000158347 104 ntBASIC1.79□□□□□ -2.12
Msx2Q03358 Gm25950-201ENSMUST00000175331 100 ntBASIC1.79□□□□□ -2.12
Msx2Q03358 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.79□□□□□ -2.12
Msx2Q03358 Gm24151-201ENSMUST00000082758 141 ntBASIC1.79□□□□□ -2.12
Msx2Q03358 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.12
Msx2Q03358 Gm23951-201ENSMUST00000104029 132 ntBASIC1.78□□□□□ -2.12
Msx2Q03358 Gm23482-201ENSMUST00000104172 122 ntBASIC1.78□□□□□ -2.12
Msx2Q03358 U6.1-201ENSMUST00000157443 101 ntBASIC1.78□□□□□ -2.12
Msx2Q03358 Gm22914-201ENSMUST00000175195 77 ntBASIC1.78□□□□□ -2.12
Msx2Q03358 Gm27511-201ENSMUST00000183502 127 ntBASIC1.78□□□□□ -2.12
Msx2Q03358 Gm44477-201ENSMUST00000199661 110 ntBASIC1.78□□□□□ -2.12
Msx2Q03358 AC144671.1-201ENSMUST00000215265 99 ntBASIC1.78□□□□□ -2.12
Msx2Q03358 mt-Tl2-201ENSMUST00000082417 71 ntBASIC1.78□□□□□ -2.12
Msx2Q03358 Gm25423-201ENSMUST00000157609 107 ntBASIC1.77□□□□□ -2.13
Msx2Q03358 Gm44602-201ENSMUST00000205948 132 ntBASIC1.77□□□□□ -2.13
Msx2Q03358 Snord14a-201ENSMUST00000082807 87 ntBASIC1.77□□□□□ -2.13
Msx2Q03358 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Msx2Q03358 Gm24783-201ENSMUST00000157639 100 ntBASIC1.76□□□□□ -2.13
Msx2Q03358 Gm24229-201ENSMUST00000158830 118 ntBASIC1.76□□□□□ -2.13
Msx2Q03358 Mir6901-201ENSMUST00000185062 62 ntBASIC1.76□□□□□ -2.13
Msx2Q03358 AC157602.1-201ENSMUST00000197446 105 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 204 ms