Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.68□□□□□ -1.34
SSX2IPQ9Y2D8 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SSX2IPQ9Y2D8 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC6.68□□□□□ -1.34
SSX2IPQ9Y2D8 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.68□□□□□ -1.34
SSX2IPQ9Y2D8 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
SSX2IPQ9Y2D8 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SSX2IPQ9Y2D8 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
SSX2IPQ9Y2D8 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SSX2IPQ9Y2D8 AL359976.1-201ENST00000418655 3528 ntBASIC6.68□□□□□ -1.34
SSX2IPQ9Y2D8 AL592494.2-201ENST00000425455 1548 ntBASIC6.68□□□□□ -1.34
SSX2IPQ9Y2D8 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SSX2IPQ9Y2D8 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SSX2IPQ9Y2D8 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SSX2IPQ9Y2D8 RNA5SP510-201ENST00000364697 99 ntBASIC6.68□□□□□ -1.34
SSX2IPQ9Y2D8 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SSX2IPQ9Y2D8 MIR130B-202ENST00000385018 82 ntBASIC6.68□□□□□ -1.34
SSX2IPQ9Y2D8 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
SSX2IPQ9Y2D8 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SSX2IPQ9Y2D8 AL451046.1-201ENST00000406097 534 ntBASIC6.68□□□□□ -1.34
SSX2IPQ9Y2D8 UBE2V1P15-201ENST00000407776 448 ntBASIC6.68□□□□□ -1.34
SSX2IPQ9Y2D8 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SSX2IPQ9Y2D8 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC6.68□□□□□ -1.34
SSX2IPQ9Y2D8 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC6.68□□□□□ -1.34
SSX2IPQ9Y2D8 SETP20-201ENST00000457046 852 ntBASIC6.68□□□□□ -1.34
SSX2IPQ9Y2D8 ACA64.1-201ENST00000459171 127 ntBASIC6.68□□□□□ -1.34
SSX2IPQ9Y2D8 ATG10-AS1-201ENST00000504846 648 ntBASIC6.68□□□□□ -1.34
SSX2IPQ9Y2D8 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.68□□□□□ -1.34
SSX2IPQ9Y2D8 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC6.68□□□□□ -1.34
SSX2IPQ9Y2D8 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC6.68□□□□□ -1.34
SSX2IPQ9Y2D8 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.68□□□□□ -1.34
SSX2IPQ9Y2D8 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.68□□□□□ -1.34
SSX2IPQ9Y2D8 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC6.68□□□□□ -1.34
SSX2IPQ9Y2D8 AP000619.2-201ENST00000546014 969 ntBASIC6.68□□□□□ -1.34
SSX2IPQ9Y2D8 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.68□□□□□ -1.34
SSX2IPQ9Y2D8 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC6.68□□□□□ -1.34
SSX2IPQ9Y2D8 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC6.68□□□□□ -1.34
SSX2IPQ9Y2D8 AC012414.2-201ENST00000559474 187 ntBASIC6.68□□□□□ -1.34
SSX2IPQ9Y2D8 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.68□□□□□ -1.34
SSX2IPQ9Y2D8 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC6.68□□□□□ -1.34
SSX2IPQ9Y2D8 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC6.68□□□□□ -1.34
SSX2IPQ9Y2D8 AC008521.2-201ENST00000591021 259 ntBASIC6.68□□□□□ -1.34
SSX2IPQ9Y2D8 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SSX2IPQ9Y2D8 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC6.68□□□□□ -1.34
SSX2IPQ9Y2D8 BNIP3P19-201ENST00000605397 577 ntBASIC6.68□□□□□ -1.34
SSX2IPQ9Y2D8 RPL12P48-201ENST00000605620 304 ntBASIC6.68□□□□□ -1.34
SSX2IPQ9Y2D8 AL512652.1-201ENST00000619006 500 ntBASIC6.68□□□□□ -1.34
SSX2IPQ9Y2D8 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.68□□□□□ -1.34
SSX2IPQ9Y2D8 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC6.68□□□□□ -1.34
SSX2IPQ9Y2D8 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SSX2IPQ9Y2D8 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SSX2IPQ9Y2D8 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
SSX2IPQ9Y2D8 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.68□□□□□ -1.34
SSX2IPQ9Y2D8 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.68□□□□□ -1.34
SSX2IPQ9Y2D8 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
SSX2IPQ9Y2D8 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.68□□□□□ -1.34
SSX2IPQ9Y2D8 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.67□□□□□ -1.34
SSX2IPQ9Y2D8 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SSX2IPQ9Y2D8 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC6.67□□□□□ -1.34
SSX2IPQ9Y2D8 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC6.67□□□□□ -1.34
SSX2IPQ9Y2D8 KARSP1-201ENST00000451871 1752 ntBASIC6.67□□□□□ -1.34
SSX2IPQ9Y2D8 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SSX2IPQ9Y2D8 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.67□□□□□ -1.34
SSX2IPQ9Y2D8 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC6.67□□□□□ -1.34
SSX2IPQ9Y2D8 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SSX2IPQ9Y2D8 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
SSX2IPQ9Y2D8 RNU1-134P-201ENST00000362935 165 ntBASIC6.67□□□□□ -1.34
SSX2IPQ9Y2D8 RNA5SP156-201ENST00000410250 110 ntBASIC6.67□□□□□ -1.34
SSX2IPQ9Y2D8 RN7SKP206-201ENST00000410823 293 ntBASIC6.67□□□□□ -1.34
SSX2IPQ9Y2D8 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.67□□□□□ -1.34
SSX2IPQ9Y2D8 RPS7P8-201ENST00000418311 581 ntBASIC6.67□□□□□ -1.34
SSX2IPQ9Y2D8 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.67□□□□□ -1.34
SSX2IPQ9Y2D8 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC6.67□□□□□ -1.34
SSX2IPQ9Y2D8 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.67□□□□□ -1.34
SSX2IPQ9Y2D8 AC104843.2-201ENST00000427666 297 ntBASIC6.67□□□□□ -1.34
SSX2IPQ9Y2D8 RPL34P27-201ENST00000428810 349 ntBASIC6.67□□□□□ -1.34
SSX2IPQ9Y2D8 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.67□□□□□ -1.34
SSX2IPQ9Y2D8 NXT1P1-201ENST00000458481 316 ntBASIC6.67□□□□□ -1.34
SSX2IPQ9Y2D8 AC092865.4-201ENST00000477936 615 ntBASIC6.67□□□□□ -1.34
SSX2IPQ9Y2D8 DEFB109A-201ENST00000482450 265 ntBASIC6.67□□□□□ -1.34
SSX2IPQ9Y2D8 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SSX2IPQ9Y2D8 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.67□□□□□ -1.34
SSX2IPQ9Y2D8 AC011411.1-201ENST00000509592 876 ntBASIC6.67□□□□□ -1.34
SSX2IPQ9Y2D8 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC6.67□□□□□ -1.34
SSX2IPQ9Y2D8 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC6.67□□□□□ -1.34
SSX2IPQ9Y2D8 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.67□□□□□ -1.34
SSX2IPQ9Y2D8 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC6.67□□□□□ -1.34
SSX2IPQ9Y2D8 MTND1P6-201ENST00000523621 946 ntBASIC6.67□□□□□ -1.34
SSX2IPQ9Y2D8 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC6.67□□□□□ -1.34
SSX2IPQ9Y2D8 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.67□□□□□ -1.34
SSX2IPQ9Y2D8 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.67□□□□□ -1.34
SSX2IPQ9Y2D8 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.67□□□□□ -1.34
SSX2IPQ9Y2D8 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.67□□□□□ -1.34
SSX2IPQ9Y2D8 OOSP1P2-201ENST00000579644 351 ntBASIC6.67□□□□□ -1.34
SSX2IPQ9Y2D8 MIR3614-201ENST00000581261 86 ntBASIC6.67□□□□□ -1.34
SSX2IPQ9Y2D8 MIR4433B-201ENST00000581329 102 ntBASIC6.67□□□□□ -1.34
SSX2IPQ9Y2D8 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.67□□□□□ -1.34
SSX2IPQ9Y2D8 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC6.67□□□□□ -1.34
SSX2IPQ9Y2D8 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.67□□□□□ -1.34
SSX2IPQ9Y2D8 OR7A11P-201ENST00000597719 953 ntBASIC6.67□□□□□ -1.34
SSX2IPQ9Y2D8 AC040174.2-201ENST00000602701 465 ntBASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms