Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 MFSD8-239ENST00000641590 2479 ntBASIC5.67□□□□□ -1.5
PKNOX1P55347 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
PKNOX1P55347 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.67□□□□□ -1.5
PKNOX1P55347 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PKNOX1P55347 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
PKNOX1P55347 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
PKNOX1P55347 RNA5SP91-201ENST00000390902 119 ntBASIC5.67□□□□□ -1.5
PKNOX1P55347 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PKNOX1P55347 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.67□□□□□ -1.5
PKNOX1P55347 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC5.67□□□□□ -1.5
PKNOX1P55347 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC5.67□□□□□ -1.5
PKNOX1P55347 RPSAP32-201ENST00000432681 526 ntBASIC5.67□□□□□ -1.5
PKNOX1P55347 AL353662.1-201ENST00000439099 327 ntBASIC5.67□□□□□ -1.5
PKNOX1P55347 SERPINA7P1-201ENST00000443077 631 ntBASIC5.67□□□□□ -1.5
PKNOX1P55347 HMGB1P7-201ENST00000450921 612 ntBASIC5.67□□□□□ -1.5
PKNOX1P55347 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.67□□□□□ -1.5
PKNOX1P55347 AC018980.1-201ENST00000457848 862 ntTSL 3 BASIC5.67□□□□□ -1.5
PKNOX1P55347 RN7SL269P-201ENST00000467795 305 ntBASIC5.67□□□□□ -1.5
PKNOX1P55347 OR7E157P-201ENST00000494376 911 ntBASIC5.67□□□□□ -1.5
PKNOX1P55347 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC5.67□□□□□ -1.5
PKNOX1P55347 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.67□□□□□ -1.5
PKNOX1P55347 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC5.67□□□□□ -1.5
PKNOX1P55347 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.67□□□□□ -1.5
PKNOX1P55347 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.67□□□□□ -1.5
PKNOX1P55347 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.67□□□□□ -1.5
PKNOX1P55347 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC5.67□□□□□ -1.5
PKNOX1P55347 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC5.67□□□□□ -1.5
PKNOX1P55347 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC5.67□□□□□ -1.5
PKNOX1P55347 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.67□□□□□ -1.5
PKNOX1P55347 AC092332.1-201ENST00000563684 829 ntBASIC5.67□□□□□ -1.5
PKNOX1P55347 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.67□□□□□ -1.5
PKNOX1P55347 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.67□□□□□ -1.5
PKNOX1P55347 HIRAP1-201ENST00000605318 787 ntBASIC5.67□□□□□ -1.5
PKNOX1P55347 AL021918.2-201ENST00000613415 194 ntBASIC5.67□□□□□ -1.5
PKNOX1P55347 AC015712.7-201ENST00000615211 635 ntBASIC5.67□□□□□ -1.5
PKNOX1P55347 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.67□□□□□ -1.5
PKNOX1P55347 AC005618.4-201ENST00000625053 554 ntBASIC5.67□□□□□ -1.5
PKNOX1P55347 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.67□□□□□ -1.5
PKNOX1P55347 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PKNOX1P55347 AL034546.1-201ENST00000623740 3693 ntBASIC5.67□□□□□ -1.5
PKNOX1P55347 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
PKNOX1P55347 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.67□□□□□ -1.5
PKNOX1P55347 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PKNOX1P55347 HSPD1P9-201ENST00000420325 1636 ntBASIC5.66□□□□□ -1.5
PKNOX1P55347 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PKNOX1P55347 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PKNOX1P55347 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PKNOX1P55347 AC008627.1-201ENST00000517511 1704 ntBASIC5.66□□□□□ -1.5
PKNOX1P55347 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.66□□□□□ -1.5
PKNOX1P55347 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PKNOX1P55347 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.66□□□□□ -1.5
PKNOX1P55347 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PKNOX1P55347 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
PKNOX1P55347 RN7SKP185-201ENST00000362813 326 ntBASIC5.66□□□□□ -1.5
PKNOX1P55347 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
PKNOX1P55347 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PKNOX1P55347 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.66□□□□□ -1.5
PKNOX1P55347 MIR191-201ENST00000384873 92 ntBASIC5.66□□□□□ -1.5
PKNOX1P55347 AL034417.1-201ENST00000399343 800 ntBASIC5.66□□□□□ -1.5
PKNOX1P55347 AC016739.1-201ENST00000405359 345 ntBASIC5.66□□□□□ -1.5
PKNOX1P55347 AC017078.1-201ENST00000416146 368 ntBASIC5.66□□□□□ -1.5
PKNOX1P55347 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.66□□□□□ -1.5
PKNOX1P55347 REREP1Y-201ENST00000422655 198 ntBASIC5.66□□□□□ -1.5
PKNOX1P55347 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.66□□□□□ -1.5
PKNOX1P55347 GAPDHP59-201ENST00000435908 267 ntBASIC5.66□□□□□ -1.5
PKNOX1P55347 REREP2Y-201ENST00000439103 200 ntBASIC5.66□□□□□ -1.5
PKNOX1P55347 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.66□□□□□ -1.5
PKNOX1P55347 AC097463.1-201ENST00000447288 481 ntBASIC5.66□□□□□ -1.5
PKNOX1P55347 RPS23P9-201ENST00000448848 438 ntBASIC5.66□□□□□ -1.5
PKNOX1P55347 OR52I1-201ENST00000450052 1050 ntBASIC5.66□□□□□ -1.5
PKNOX1P55347 AC105384.2-201ENST00000508433 640 ntBASIC5.66□□□□□ -1.5
PKNOX1P55347 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC5.66□□□□□ -1.5
PKNOX1P55347 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.66□□□□□ -1.5
PKNOX1P55347 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.66□□□□□ -1.5
PKNOX1P55347 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.66□□□□□ -1.5
PKNOX1P55347 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
PKNOX1P55347 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PKNOX1P55347 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.66□□□□□ -1.5
PKNOX1P55347 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC5.66□□□□□ -1.5
PKNOX1P55347 AC002519.2-203ENST00000567043 837 ntBASIC5.66□□□□□ -1.5
PKNOX1P55347 AC016839.1-201ENST00000578162 867 ntBASIC5.66□□□□□ -1.5
PKNOX1P55347 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.66□□□□□ -1.5
PKNOX1P55347 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.66□□□□□ -1.5
PKNOX1P55347 AL139041.1-201ENST00000605480 610 ntBASIC5.66□□□□□ -1.5
PKNOX1P55347 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.66□□□□□ -1.5
PKNOX1P55347 AL136131.3-201ENST00000607600 188 ntBASIC5.66□□□□□ -1.5
PKNOX1P55347 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.66□□□□□ -1.5
PKNOX1P55347 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.66□□□□□ -1.5
PKNOX1P55347 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PKNOX1P55347 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.66□□□□□ -1.5
PKNOX1P55347 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.66□□□□□ -1.5
PKNOX1P55347 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.66□□□□□ -1.5
PKNOX1P55347 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC5.66□□□□□ -1.5
PKNOX1P55347 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
PKNOX1P55347 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.66□□□□□ -1.5
PKNOX1P55347 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PKNOX1P55347 AP005435.3-201ENST00000531260 3198 ntBASIC5.66□□□□□ -1.5
PKNOX1P55347 AC117409.1-201ENST00000470499 1310 ntBASIC5.66□□□□□ -1.5
PKNOX1P55347 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.66□□□□□ -1.5
PKNOX1P55347 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms