Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HMG20AQ9NP66 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.28□□□□□ -1.56
HMG20AQ9NP66 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HMG20AQ9NP66 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.28□□□□□ -1.56
HMG20AQ9NP66 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
HMG20AQ9NP66 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HMG20AQ9NP66 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HMG20AQ9NP66 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.28□□□□□ -1.56
HMG20AQ9NP66 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HMG20AQ9NP66 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.28□□□□□ -1.56
HMG20AQ9NP66 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HMG20AQ9NP66 AL133243.2-201ENST00000610331 1621 ntBASIC5.28□□□□□ -1.56
HMG20AQ9NP66 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.28□□□□□ -1.56
HMG20AQ9NP66 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.28□□□□□ -1.56
HMG20AQ9NP66 HSPE1P16-201ENST00000426640 348 ntBASIC5.28□□□□□ -1.56
HMG20AQ9NP66 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC5.28□□□□□ -1.56
HMG20AQ9NP66 AC128677.1-201ENST00000436016 442 ntBASIC5.28□□□□□ -1.56
HMG20AQ9NP66 PSMD8P1-201ENST00000436275 769 ntBASIC5.28□□□□□ -1.56
HMG20AQ9NP66 RPS4XP17-201ENST00000479057 754 ntBASIC5.28□□□□□ -1.56
HMG20AQ9NP66 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HMG20AQ9NP66 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HMG20AQ9NP66 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.28□□□□□ -1.56
HMG20AQ9NP66 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HMG20AQ9NP66 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC5.28□□□□□ -1.56
HMG20AQ9NP66 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.28□□□□□ -1.56
HMG20AQ9NP66 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC5.28□□□□□ -1.56
HMG20AQ9NP66 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC5.28□□□□□ -1.56
HMG20AQ9NP66 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC5.28□□□□□ -1.56
HMG20AQ9NP66 AC025283.1-201ENST00000572039 734 ntBASIC5.28□□□□□ -1.56
HMG20AQ9NP66 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC5.28□□□□□ -1.56
HMG20AQ9NP66 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.28□□□□□ -1.56
HMG20AQ9NP66 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.28□□□□□ -1.56
HMG20AQ9NP66 AC073488.6-201ENST00000632293 754 ntBASIC5.28□□□□□ -1.56
HMG20AQ9NP66 THAP12P5-201ENST00000405864 2275 ntBASIC5.28□□□□□ -1.56
HMG20AQ9NP66 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
HMG20AQ9NP66 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HMG20AQ9NP66 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HMG20AQ9NP66 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
HMG20AQ9NP66 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HMG20AQ9NP66 AC119674.1-202ENST00000641333 1860 ntBASIC5.28□□□□□ -1.56
HMG20AQ9NP66 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.28□□□□□ -1.56
HMG20AQ9NP66 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.28□□□□□ -1.56
HMG20AQ9NP66 AC104260.2-201ENST00000623551 3497 ntBASIC5.28□□□□□ -1.56
HMG20AQ9NP66 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
HMG20AQ9NP66 AC112198.2-201ENST00000426589 6996 ntBASIC5.28□□□□□ -1.56
HMG20AQ9NP66 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HMG20AQ9NP66 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HMG20AQ9NP66 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HMG20AQ9NP66 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HMG20AQ9NP66 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HMG20AQ9NP66 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
HMG20AQ9NP66 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HMG20AQ9NP66 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
HMG20AQ9NP66 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
HMG20AQ9NP66 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HMG20AQ9NP66 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
HMG20AQ9NP66 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
HMG20AQ9NP66 RNA5SP485-201ENST00000365053 119 ntBASIC5.27□□□□□ -1.57
HMG20AQ9NP66 AC121334.1-201ENST00000396414 802 ntBASIC5.27□□□□□ -1.57
HMG20AQ9NP66 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.27□□□□□ -1.57
HMG20AQ9NP66 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.27□□□□□ -1.57
HMG20AQ9NP66 DHFRP2-201ENST00000414224 547 ntBASIC5.27□□□□□ -1.57
HMG20AQ9NP66 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC5.27□□□□□ -1.57
HMG20AQ9NP66 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC5.27□□□□□ -1.57
HMG20AQ9NP66 AL360013.1-201ENST00000419031 858 ntBASIC5.27□□□□□ -1.57
HMG20AQ9NP66 RNGTTP1-201ENST00000420965 728 ntBASIC5.27□□□□□ -1.57
HMG20AQ9NP66 OR10T1P-201ENST00000424327 947 ntBASIC5.27□□□□□ -1.57
HMG20AQ9NP66 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.27□□□□□ -1.57
HMG20AQ9NP66 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC5.27□□□□□ -1.57
HMG20AQ9NP66 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.27□□□□□ -1.57
HMG20AQ9NP66 AL031681.1-201ENST00000443304 400 ntBASIC5.27□□□□□ -1.57
HMG20AQ9NP66 OR2L9P-201ENST00000444456 913 ntBASIC5.27□□□□□ -1.57
HMG20AQ9NP66 AC099670.1-201ENST00000455141 783 ntBASIC5.27□□□□□ -1.57
HMG20AQ9NP66 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.27□□□□□ -1.57
HMG20AQ9NP66 RN7SL836P-201ENST00000476140 296 ntBASIC5.27□□□□□ -1.57
HMG20AQ9NP66 RPL12P31-201ENST00000478433 450 ntBASIC5.27□□□□□ -1.57
HMG20AQ9NP66 GM2AP2-201ENST00000491764 562 ntBASIC5.27□□□□□ -1.57
HMG20AQ9NP66 AL049874.2-201ENST00000492636 288 ntBASIC5.27□□□□□ -1.57
HMG20AQ9NP66 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HMG20AQ9NP66 KHDC1P1-201ENST00000511053 508 ntBASIC5.27□□□□□ -1.57
HMG20AQ9NP66 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC5.27□□□□□ -1.57
HMG20AQ9NP66 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC5.27□□□□□ -1.57
HMG20AQ9NP66 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC5.27□□□□□ -1.57
HMG20AQ9NP66 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
HMG20AQ9NP66 CYCSP25-201ENST00000525280 316 ntBASIC5.27□□□□□ -1.57
HMG20AQ9NP66 OR4A17P-201ENST00000526032 904 ntBASIC5.27□□□□□ -1.57
HMG20AQ9NP66 GTF2IP11-201ENST00000526931 420 ntBASIC5.27□□□□□ -1.57
HMG20AQ9NP66 AC135983.3-201ENST00000528049 1226 ntBASIC5.27□□□□□ -1.57
HMG20AQ9NP66 AC124891.1-201ENST00000536322 519 ntBASIC5.27□□□□□ -1.57
HMG20AQ9NP66 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC5.27□□□□□ -1.57
HMG20AQ9NP66 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC5.27□□□□□ -1.57
HMG20AQ9NP66 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.27□□□□□ -1.57
HMG20AQ9NP66 AC127024.5-201ENST00000580085 462 ntBASIC5.27□□□□□ -1.57
HMG20AQ9NP66 RNU4ATAC-201ENST00000580972 127 ntBASIC5.27□□□□□ -1.57
HMG20AQ9NP66 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC5.27□□□□□ -1.57
HMG20AQ9NP66 MIR3936-201ENST00000584304 110 ntBASIC5.27□□□□□ -1.57
HMG20AQ9NP66 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HMG20AQ9NP66 AL049840.6-201ENST00000604583 345 ntBASIC5.27□□□□□ -1.57
HMG20AQ9NP66 AC010632.3-201ENST00000611377 369 ntBASIC5.27□□□□□ -1.57
HMG20AQ9NP66 AC010998.3-201ENST00000613871 631 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 648.8 ms