Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Gm25815-201ENSMUST00000082755 107 ntBASIC1.66□□□□□ -2.14
Cldnd1Q9CQX5 Mir448-201ENSMUST00000083516 112 ntBASIC1.66□□□□□ -2.14
Cldnd1Q9CQX5 Gm25089-201ENSMUST00000102015 79 ntBASIC1.65□□□□□ -2.15
Cldnd1Q9CQX5 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
Cldnd1Q9CQX5 Mir544-201ENSMUST00000103813 78 ntBASIC1.65□□□□□ -2.15
Cldnd1Q9CQX5 Gm24482-201ENSMUST00000117005 93 ntBASIC1.65□□□□□ -2.15
Cldnd1Q9CQX5 Gm23122-201ENSMUST00000157645 103 ntBASIC1.65□□□□□ -2.15
Cldnd1Q9CQX5 Gm23375-201ENSMUST00000175407 83 ntBASIC1.65□□□□□ -2.15
Cldnd1Q9CQX5 Gm25840-201ENSMUST00000177821 79 ntBASIC1.65□□□□□ -2.15
Cldnd1Q9CQX5 Gm24952-201ENSMUST00000177909 79 ntBASIC1.65□□□□□ -2.15
Cldnd1Q9CQX5 Gm23682-201ENSMUST00000178146 79 ntBASIC1.65□□□□□ -2.15
Cldnd1Q9CQX5 Gm24652-201ENSMUST00000178223 79 ntBASIC1.65□□□□□ -2.15
Cldnd1Q9CQX5 Gm22629-201ENSMUST00000178272 79 ntBASIC1.65□□□□□ -2.15
Cldnd1Q9CQX5 Gm24021-201ENSMUST00000178435 79 ntBASIC1.65□□□□□ -2.15
Cldnd1Q9CQX5 Gm22274-201ENSMUST00000178441 79 ntBASIC1.65□□□□□ -2.15
Cldnd1Q9CQX5 Gm22050-201ENSMUST00000178442 79 ntBASIC1.65□□□□□ -2.15
Cldnd1Q9CQX5 Gm23688-201ENSMUST00000178502 79 ntBASIC1.65□□□□□ -2.15
Cldnd1Q9CQX5 Gm23944-201ENSMUST00000178607 79 ntBASIC1.65□□□□□ -2.15
Cldnd1Q9CQX5 Gm26283-201ENSMUST00000178625 79 ntBASIC1.65□□□□□ -2.15
Cldnd1Q9CQX5 Gm25452-201ENSMUST00000178776 79 ntBASIC1.65□□□□□ -2.15
Cldnd1Q9CQX5 Gm23286-201ENSMUST00000178963 79 ntBASIC1.65□□□□□ -2.15
Cldnd1Q9CQX5 Gm22640-201ENSMUST00000179035 79 ntBASIC1.65□□□□□ -2.15
Cldnd1Q9CQX5 Gm25984-201ENSMUST00000179129 79 ntBASIC1.65□□□□□ -2.15
Cldnd1Q9CQX5 Gm25585-201ENSMUST00000179469 79 ntBASIC1.65□□□□□ -2.15
Cldnd1Q9CQX5 Gm26374-201ENSMUST00000179737 79 ntBASIC1.65□□□□□ -2.15
Cldnd1Q9CQX5 Gm24040-201ENSMUST00000179786 79 ntBASIC1.65□□□□□ -2.15
Cldnd1Q9CQX5 Gm25017-201ENSMUST00000179805 79 ntBASIC1.65□□□□□ -2.15
Cldnd1Q9CQX5 Gm23618-201ENSMUST00000179912 79 ntBASIC1.65□□□□□ -2.15
Cldnd1Q9CQX5 Gm26284-201ENSMUST00000180107 79 ntBASIC1.65□□□□□ -2.15
Cldnd1Q9CQX5 Gm24570-201ENSMUST00000180314 79 ntBASIC1.65□□□□□ -2.15
Cldnd1Q9CQX5 Gm24654-201ENSMUST00000180315 79 ntBASIC1.65□□□□□ -2.15
Cldnd1Q9CQX5 Mir6379-201ENSMUST00000183392 115 ntBASIC1.65□□□□□ -2.15
Cldnd1Q9CQX5 Mir7052-201ENSMUST00000184821 65 ntBASIC1.65□□□□□ -2.15
Cldnd1Q9CQX5 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.65□□□□□ -2.15
Cldnd1Q9CQX5 Gm44384-201ENSMUST00000200208 114 ntBASIC1.65□□□□□ -2.15
Cldnd1Q9CQX5 Gm23299-201ENSMUST00000082708 79 ntBASIC1.65□□□□□ -2.15
Cldnd1Q9CQX5 Mir30d-201ENSMUST00000083503 82 ntBASIC1.65□□□□□ -2.15
Cldnd1Q9CQX5 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.65□□□□□ -2.15
Cldnd1Q9CQX5 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Cldnd1Q9CQX5 Gm22494-201ENSMUST00000104495 128 ntBASIC1.64□□□□□ -2.15
Cldnd1Q9CQX5 Gm22451-201ENSMUST00000122803 151 ntBASIC1.64□□□□□ -2.15
Cldnd1Q9CQX5 U6.1-201ENSMUST00000157443 101 ntBASIC1.64□□□□□ -2.15
Cldnd1Q9CQX5 Gm25044-201ENSMUST00000158603 104 ntBASIC1.64□□□□□ -2.15
Cldnd1Q9CQX5 Gm16976-205ENSMUST00000227324 226 ntBASIC1.64□□□□□ -2.15
Cldnd1Q9CQX5 Gm26456-201ENSMUST00000082831 111 ntBASIC1.64□□□□□ -2.15
Cldnd1Q9CQX5 Gm25611-201ENSMUST00000104017 133 ntBASIC1.63□□□□□ -2.15
Cldnd1Q9CQX5 Gm23083-201ENSMUST00000157851 116 ntBASIC1.63□□□□□ -2.15
Cldnd1Q9CQX5 Gm25011-201ENSMUST00000158398 126 ntBASIC1.63□□□□□ -2.15
Cldnd1Q9CQX5 Gm25838-201ENSMUST00000158920 120 ntBASIC1.63□□□□□ -2.15
Cldnd1Q9CQX5 Gm24154-201ENSMUST00000175261 130 ntBASIC1.63□□□□□ -2.15
Cldnd1Q9CQX5 AC136457.1-201ENSMUST00000224195 156 ntBASIC1.63□□□□□ -2.15
Cldnd1Q9CQX5 Gm24406-201ENSMUST00000083026 128 ntBASIC1.63□□□□□ -2.15
Cldnd1Q9CQX5 Gm26123-201ENSMUST00000083363 135 ntBASIC1.63□□□□□ -2.15
Cldnd1Q9CQX5 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
Cldnd1Q9CQX5 Gm23907-201ENSMUST00000104595 189 ntBASIC1.62□□□□□ -2.15
Cldnd1Q9CQX5 Gm22815-201ENSMUST00000157451 62 ntBASIC1.62□□□□□ -2.15
Cldnd1Q9CQX5 Gm24783-201ENSMUST00000157639 100 ntBASIC1.62□□□□□ -2.15
Cldnd1Q9CQX5 Gm22425-201ENSMUST00000158532 138 ntBASIC1.62□□□□□ -2.15
Cldnd1Q9CQX5 Gm22200-201ENSMUST00000158614 67 ntBASIC1.62□□□□□ -2.15
Cldnd1Q9CQX5 Mir3098-201ENSMUST00000175416 87 ntBASIC1.62□□□□□ -2.15
Cldnd1Q9CQX5 Gm27511-201ENSMUST00000183502 127 ntBASIC1.62□□□□□ -2.15
Cldnd1Q9CQX5 Gm42795-201ENSMUST00000198847 76 ntBASIC1.62□□□□□ -2.15
Cldnd1Q9CQX5 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.62□□□□□ -2.15
Cldnd1Q9CQX5 Gm24624-201ENSMUST00000082617 164 ntBASIC1.62□□□□□ -2.15
Cldnd1Q9CQX5 Gm26054-201ENSMUST00000083037 107 ntBASIC1.62□□□□□ -2.15
Cldnd1Q9CQX5 Gm24492-201ENSMUST00000083798 107 ntBASIC1.62□□□□□ -2.15
Cldnd1Q9CQX5 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.61□□□□□ -2.15
Cldnd1Q9CQX5 Mir343-201ENSMUST00000102360 75 ntBASIC1.61□□□□□ -2.15
Cldnd1Q9CQX5 Gm26301-201ENSMUST00000104813 95 ntBASIC1.61□□□□□ -2.15
Cldnd1Q9CQX5 Gm23329-201ENSMUST00000157415 108 ntBASIC1.61□□□□□ -2.15
Cldnd1Q9CQX5 Gm23558-201ENSMUST00000157823 80 ntBASIC1.61□□□□□ -2.15
Cldnd1Q9CQX5 Gm8034-201ENSMUST00000178853 132 ntBASIC1.61□□□□□ -2.15
Cldnd1Q9CQX5 Gm44462-201ENSMUST00000199696 129 ntBASIC1.61□□□□□ -2.15
Cldnd1Q9CQX5 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.61□□□□□ -2.15
Cldnd1Q9CQX5 Gm23419-201ENSMUST00000175523 84 ntBASIC1.6□□□□□ -2.15
Cldnd1Q9CQX5 Gm28256-201ENSMUST00000188953 139 ntBASIC1.6□□□□□ -2.15
Cldnd1Q9CQX5 Gm28559-201ENSMUST00000190532 139 ntBASIC1.6□□□□□ -2.15
Cldnd1Q9CQX5 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.6□□□□□ -2.15
Cldnd1Q9CQX5 AC126939.1-201ENSMUST00000224943 226 ntBASIC1.6□□□□□ -2.15
Cldnd1Q9CQX5 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC1.6□□□□□ -2.15
Cldnd1Q9CQX5 Snord1a-201ENSMUST00000083160 74 ntBASIC1.6□□□□□ -2.15
Cldnd1Q9CQX5 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
Cldnd1Q9CQX5 Gm25610-201ENSMUST00000104016 129 ntBASIC1.59□□□□□ -2.15
Cldnd1Q9CQX5 Gm12013-201ENSMUST00000121971 155 ntBASIC1.59□□□□□ -2.15
Cldnd1Q9CQX5 Gm24894-201ENSMUST00000122744 118 ntBASIC1.59□□□□□ -2.15
Cldnd1Q9CQX5 Gm22082-201ENSMUST00000157587 161 ntBASIC1.59□□□□□ -2.15
Cldnd1Q9CQX5 Gm24677-201ENSMUST00000158755 150 ntBASIC1.59□□□□□ -2.15
Cldnd1Q9CQX5 Snora24-201ENSMUST00000174989 130 ntBASIC1.59□□□□□ -2.15
Cldnd1Q9CQX5 Gm22929-201ENSMUST00000175517 107 ntBASIC1.59□□□□□ -2.15
Cldnd1Q9CQX5 Gm37330-201ENSMUST00000192606 153 ntBASIC1.59□□□□□ -2.15
Cldnd1Q9CQX5 Mir369-201ENSMUST00000083627 79 ntBASIC1.59□□□□□ -2.15
Cldnd1Q9CQX5 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.16
Cldnd1Q9CQX5 Gm24984-201ENSMUST00000104454 133 ntBASIC1.58□□□□□ -2.16
Cldnd1Q9CQX5 Gm22196-201ENSMUST00000116865 109 ntBASIC1.58□□□□□ -2.16
Cldnd1Q9CQX5 Gm22802-201ENSMUST00000175621 89 ntBASIC1.58□□□□□ -2.16
Cldnd1Q9CQX5 Gm25646-201ENSMUST00000178527 79 ntBASIC1.58□□□□□ -2.16
Cldnd1Q9CQX5 AC141438.3-201ENSMUST00000215632 202 ntBASIC1.58□□□□□ -2.16
Cldnd1Q9CQX5 Gm12086-201ENSMUST00000120863 228 ntBASIC1.57□□□□□ -2.16
Cldnd1Q9CQX5 Gm23106-201ENSMUST00000157554 101 ntBASIC1.57□□□□□ -2.16
Cldnd1Q9CQX5 Gm27493-201ENSMUST00000184128 78 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 158.9 ms