Protein–RNA interactions for Protein: O88689

Pcdha4, Protocadherin alpha-4, mousemouse

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha4O88689 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Pcdha4O88689 Gm26181-201ENSMUST00000157687 106 ntBASIC1.84□□□□□ -2.11
Pcdha4O88689 Gm23083-201ENSMUST00000157851 116 ntBASIC1.84□□□□□ -2.11
Pcdha4O88689 Gm20391-201ENSMUST00000174722 106 ntBASIC1.84□□□□□ -2.11
Pcdha4O88689 Gm26498-201ENSMUST00000177799 79 ntBASIC1.84□□□□□ -2.11
Pcdha4O88689 Gm26230-201ENSMUST00000180141 79 ntBASIC1.84□□□□□ -2.11
Pcdha4O88689 Mir7225-201ENSMUST00000184178 54 ntBASIC1.84□□□□□ -2.11
Pcdha4O88689 Gm22004-201ENSMUST00000101884 107 ntBASIC1.83□□□□□ -2.12
Pcdha4O88689 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Pcdha4O88689 Gm25377-201ENSMUST00000104334 129 ntBASIC1.83□□□□□ -2.12
Pcdha4O88689 Gm23654-201ENSMUST00000116758 126 ntBASIC1.83□□□□□ -2.12
Pcdha4O88689 Gm24913-201ENSMUST00000157286 107 ntBASIC1.83□□□□□ -2.12
Pcdha4O88689 Gm25678-201ENSMUST00000174984 73 ntBASIC1.83□□□□□ -2.12
Pcdha4O88689 mt-Ts2-201ENSMUST00000082416 59 ntBASIC1.83□□□□□ -2.12
Pcdha4O88689 Gm43473-201ENSMUST00000200442 5997 ntBASIC1.82□□□□□ -2.12
Pcdha4O88689 Mir3096-201ENSMUST00000116685 71 ntBASIC1.82□□□□□ -2.12
Pcdha4O88689 Gm23670-201ENSMUST00000157469 119 ntBASIC1.82□□□□□ -2.12
Pcdha4O88689 Gm25035-201ENSMUST00000175414 77 ntBASIC1.82□□□□□ -2.12
Pcdha4O88689 Gm45429-201ENSMUST00000209527 172 ntBASIC1.82□□□□□ -2.12
Pcdha4O88689 Gm24877-201ENSMUST00000158779 116 ntBASIC1.81□□□□□ -2.12
Pcdha4O88689 Gm25069-201ENSMUST00000175238 86 ntBASIC1.81□□□□□ -2.12
Pcdha4O88689 Gm18433-201ENSMUST00000192747 197 ntBASIC1.81□□□□□ -2.12
Pcdha4O88689 Gm24523-201ENSMUST00000083965 132 ntBASIC1.81□□□□□ -2.12
Pcdha4O88689 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Pcdha4O88689 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Pcdha4O88689 Mir223-201ENSMUST00000102112 110 ntBASIC1.8□□□□□ -2.12
Pcdha4O88689 Gm22031-201ENSMUST00000116945 126 ntBASIC1.8□□□□□ -2.12
Pcdha4O88689 Gm14674-201ENSMUST00000117816 342 ntBASIC1.8□□□□□ -2.12
Pcdha4O88689 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC1.8□□□□□ -2.12
Pcdha4O88689 Gm24406-201ENSMUST00000083026 128 ntBASIC1.8□□□□□ -2.12
Pcdha4O88689 Gm25544-201ENSMUST00000122676 120 ntBASIC1.79□□□□□ -2.12
Pcdha4O88689 Gm25978-201ENSMUST00000158698 90 ntBASIC1.79□□□□□ -2.12
Pcdha4O88689 AC124687.1-201ENSMUST00000221868 189 ntBASIC1.79□□□□□ -2.12
Pcdha4O88689 Gm25423-201ENSMUST00000157609 107 ntBASIC1.78□□□□□ -2.12
Pcdha4O88689 Gm25241-201ENSMUST00000174909 84 ntBASIC1.78□□□□□ -2.12
Pcdha4O88689 Gm26217-201ENSMUST00000175212 84 ntBASIC1.78□□□□□ -2.12
Pcdha4O88689 Gm25949-201ENSMUST00000175333 114 ntBASIC1.78□□□□□ -2.12
Pcdha4O88689 Gm28270-201ENSMUST00000188550 109 ntBASIC1.78□□□□□ -2.12
Pcdha4O88689 Gm28328-201ENSMUST00000188869 109 ntBASIC1.78□□□□□ -2.12
Pcdha4O88689 Gm42795-201ENSMUST00000198847 76 ntBASIC1.78□□□□□ -2.12
Pcdha4O88689 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC1.78□□□□□ -2.12
Pcdha4O88689 Gm25611-201ENSMUST00000104017 133 ntBASIC1.77□□□□□ -2.13
Pcdha4O88689 Mir5104-201ENSMUST00000175319 94 ntBASIC1.77□□□□□ -2.13
Pcdha4O88689 Gm22638-201ENSMUST00000179674 107 ntBASIC1.77□□□□□ -2.13
Pcdha4O88689 Gm24151-201ENSMUST00000082758 141 ntBASIC1.77□□□□□ -2.13
Pcdha4O88689 Gm23507-201ENSMUST00000083078 107 ntBASIC1.77□□□□□ -2.13
Pcdha4O88689 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Pcdha4O88689 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.77□□□□□ -2.13
Pcdha4O88689 Gm24468-201ENSMUST00000104489 104 ntBASIC1.76□□□□□ -2.13
Pcdha4O88689 Gm22386-201ENSMUST00000158192 129 ntBASIC1.76□□□□□ -2.13
Pcdha4O88689 Gm24880-201ENSMUST00000158776 85 ntBASIC1.76□□□□□ -2.13
Pcdha4O88689 Mir3061-201ENSMUST00000175129 91 ntBASIC1.76□□□□□ -2.13
Pcdha4O88689 Gm23375-201ENSMUST00000175407 83 ntBASIC1.76□□□□□ -2.13
Pcdha4O88689 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
Pcdha4O88689 Gm27248-201ENSMUST00000184004 166 ntBASIC1.76□□□□□ -2.13
Pcdha4O88689 Snora41-201ENSMUST00000082668 132 ntBASIC1.76□□□□□ -2.13
Pcdha4O88689 Gm26123-201ENSMUST00000083363 135 ntBASIC1.76□□□□□ -2.13
Pcdha4O88689 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
Pcdha4O88689 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Pcdha4O88689 Mir450b-201ENSMUST00000102095 82 ntBASIC1.75□□□□□ -2.13
Pcdha4O88689 Gm25610-201ENSMUST00000104016 129 ntBASIC1.75□□□□□ -2.13
Pcdha4O88689 Gm23170-201ENSMUST00000157158 106 ntBASIC1.75□□□□□ -2.13
Pcdha4O88689 Gm22815-201ENSMUST00000157451 62 ntBASIC1.75□□□□□ -2.13
Pcdha4O88689 Gm24229-201ENSMUST00000158830 118 ntBASIC1.75□□□□□ -2.13
Pcdha4O88689 Gm24174-201ENSMUST00000158933 111 ntBASIC1.75□□□□□ -2.13
Pcdha4O88689 Gm16539-201ENSMUST00000160086 327 ntBASIC1.75□□□□□ -2.13
Pcdha4O88689 Mir3569-201ENSMUST00000185080 58 ntBASIC1.75□□□□□ -2.13
Pcdha4O88689 AC160962.3-201ENSMUST00000225914 112 ntBASIC1.75□□□□□ -2.13
Pcdha4O88689 Snord14a-201ENSMUST00000082807 87 ntBASIC1.75□□□□□ -2.13
Pcdha4O88689 Mir7-1-201ENSMUST00000083500 108 ntBASIC1.75□□□□□ -2.13
Pcdha4O88689 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Pcdha4O88689 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
Pcdha4O88689 Gm22772-201ENSMUST00000104451 121 ntBASIC1.74□□□□□ -2.13
Pcdha4O88689 Mir654-201ENSMUST00000104787 84 ntBASIC1.74□□□□□ -2.13
Pcdha4O88689 U6.1-201ENSMUST00000157443 101 ntBASIC1.74□□□□□ -2.13
Pcdha4O88689 Gm22425-201ENSMUST00000158532 138 ntBASIC1.74□□□□□ -2.13
Pcdha4O88689 Gm25044-201ENSMUST00000158603 104 ntBASIC1.74□□□□□ -2.13
Pcdha4O88689 Gm22403-201ENSMUST00000174919 84 ntBASIC1.74□□□□□ -2.13
Pcdha4O88689 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
Pcdha4O88689 Mir320-201ENSMUST00000083594 82 ntBASIC1.74□□□□□ -2.13
Pcdha4O88689 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Pcdha4O88689 Gm23011-201ENSMUST00000104148 132 ntBASIC1.73□□□□□ -2.13
Pcdha4O88689 Gm22845-201ENSMUST00000157712 104 ntBASIC1.73□□□□□ -2.13
Pcdha4O88689 Gm25011-201ENSMUST00000158398 126 ntBASIC1.73□□□□□ -2.13
Pcdha4O88689 Gm22011-201ENSMUST00000158790 123 ntBASIC1.73□□□□□ -2.13
Pcdha4O88689 Traj61-201ENSMUST00000165025 72 ntBASIC1.73□□□□□ -2.13
Pcdha4O88689 Gm27511-201ENSMUST00000183502 127 ntBASIC1.73□□□□□ -2.13
Pcdha4O88689 Mir6351-201ENSMUST00000183826 99 ntBASIC1.73□□□□□ -2.13
Pcdha4O88689 Mir7675-201ENSMUST00000184262 58 ntBASIC1.73□□□□□ -2.13
Pcdha4O88689 Gm44807-201ENSMUST00000206115 154 ntBASIC1.73□□□□□ -2.13
Pcdha4O88689 Gm25038-201ENSMUST00000082928 130 ntBASIC1.73□□□□□ -2.13
Pcdha4O88689 Gm26421-201ENSMUST00000104279 132 ntBASIC1.72□□□□□ -2.13
Pcdha4O88689 Gm44462-201ENSMUST00000199696 129 ntBASIC1.72□□□□□ -2.13
Pcdha4O88689 Gm44408-201ENSMUST00000200205 66 ntBASIC1.72□□□□□ -2.13
Pcdha4O88689 Gm44384-201ENSMUST00000200208 114 ntBASIC1.72□□□□□ -2.13
Pcdha4O88689 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC1.72□□□□□ -2.13
Pcdha4O88689 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.71□□□□□ -2.14
Pcdha4O88689 Mir544-201ENSMUST00000103813 78 ntBASIC1.71□□□□□ -2.14
Pcdha4O88689 Snord78-201ENSMUST00000104032 66 ntBASIC1.71□□□□□ -2.14
Pcdha4O88689 Gm15115-201ENSMUST00000121145 264 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 165.3 ms