Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC7.96□□□□□ -1.14
CHMP4AQ9BY43 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC7.96□□□□□ -1.14
CHMP4AQ9BY43 AP000620.1-201ENST00000527147 504 ntBASIC7.96□□□□□ -1.14
CHMP4AQ9BY43 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC7.96□□□□□ -1.14
CHMP4AQ9BY43 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC7.96□□□□□ -1.14
CHMP4AQ9BY43 AC084759.1-201ENST00000561168 290 ntBASIC7.96□□□□□ -1.14
CHMP4AQ9BY43 MRPS21P8-201ENST00000569196 235 ntBASIC7.96□□□□□ -1.14
CHMP4AQ9BY43 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC7.96□□□□□ -1.14
CHMP4AQ9BY43 NPIPB1P-202ENST00000588786 828 ntBASIC7.96□□□□□ -1.14
CHMP4AQ9BY43 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC7.96□□□□□ -1.14
CHMP4AQ9BY43 AC079315.1-201ENST00000602952 623 ntBASIC7.96□□□□□ -1.14
CHMP4AQ9BY43 AC092266.1-201ENST00000610958 165 ntBASIC7.96□□□□□ -1.14
CHMP4AQ9BY43 AC022726.2-201ENST00000634673 547 ntBASIC7.96□□□□□ -1.14
CHMP4AQ9BY43 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
CHMP4AQ9BY43 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC7.96□□□□□ -1.14
CHMP4AQ9BY43 CCNT2P1-201ENST00000423082 1315 ntBASIC7.96□□□□□ -1.14
CHMP4AQ9BY43 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
CHMP4AQ9BY43 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
CHMP4AQ9BY43 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC7.96□□□□□ -1.14
CHMP4AQ9BY43 AC110792.3-201ENST00000595906 1614 ntBASIC7.96□□□□□ -1.14
CHMP4AQ9BY43 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
CHMP4AQ9BY43 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CHMP4AQ9BY43 AC007342.7-201ENST00000624610 2337 ntBASIC7.95□□□□□ -1.14
CHMP4AQ9BY43 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CHMP4AQ9BY43 COX6B1P3-201ENST00000312310 260 ntBASIC7.95□□□□□ -1.14
CHMP4AQ9BY43 SNORA43.1-201ENST00000364863 140 ntBASIC7.95□□□□□ -1.14
CHMP4AQ9BY43 AL139039.2-201ENST00000407436 479 ntBASIC7.95□□□□□ -1.14
CHMP4AQ9BY43 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC7.95□□□□□ -1.14
CHMP4AQ9BY43 RPL35AP31-201ENST00000418340 337 ntBASIC7.95□□□□□ -1.14
CHMP4AQ9BY43 OR51A6P-201ENST00000418680 1004 ntBASIC7.95□□□□□ -1.14
CHMP4AQ9BY43 RPL12P12-201ENST00000424633 501 ntBASIC7.95□□□□□ -1.14
CHMP4AQ9BY43 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC7.95□□□□□ -1.14
CHMP4AQ9BY43 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC7.95□□□□□ -1.14
CHMP4AQ9BY43 GAPDHP23-201ENST00000444823 993 ntBASIC7.95□□□□□ -1.14
CHMP4AQ9BY43 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC7.95□□□□□ -1.14
CHMP4AQ9BY43 RPL23AP60-201ENST00000450011 454 ntBASIC7.95□□□□□ -1.14
CHMP4AQ9BY43 CFL1P4-201ENST00000451536 498 ntBASIC7.95□□□□□ -1.14
CHMP4AQ9BY43 AC068228.1-201ENST00000461723 211 ntBASIC7.95□□□□□ -1.14
CHMP4AQ9BY43 PFN2-209ENST00000481275 560 ntTSL 4 BASIC7.95□□□□□ -1.14
CHMP4AQ9BY43 RBBP4P1-201ENST00000502424 1276 ntBASIC7.95□□□□□ -1.14
CHMP4AQ9BY43 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC7.95□□□□□ -1.14
CHMP4AQ9BY43 RPS27AP18-201ENST00000515536 459 ntBASIC7.95□□□□□ -1.14
CHMP4AQ9BY43 ARL6IP1P3-201ENST00000524544 560 ntBASIC7.95□□□□□ -1.14
CHMP4AQ9BY43 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC7.95□□□□□ -1.14
CHMP4AQ9BY43 CD24P2-201ENST00000565486 219 ntBASIC7.95□□□□□ -1.14
CHMP4AQ9BY43 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC7.95□□□□□ -1.14
CHMP4AQ9BY43 CYCSP1-201ENST00000604815 315 ntBASIC7.95□□□□□ -1.14
CHMP4AQ9BY43 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC7.95□□□□□ -1.14
CHMP4AQ9BY43 AL591167.1-201ENST00000607321 456 ntBASIC7.95□□□□□ -1.14
CHMP4AQ9BY43 AC007620.3-201ENST00000608131 497 ntBASIC7.95□□□□□ -1.14
CHMP4AQ9BY43 AC004241.3-201ENST00000611728 517 ntBASIC7.95□□□□□ -1.14
CHMP4AQ9BY43 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC7.95□□□□□ -1.14
CHMP4AQ9BY43 AL122125.1-201ENST00000616999 600 ntBASIC7.95□□□□□ -1.14
CHMP4AQ9BY43 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
CHMP4AQ9BY43 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
CHMP4AQ9BY43 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CHMP4AQ9BY43 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC7.95□□□□□ -1.14
CHMP4AQ9BY43 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CHMP4AQ9BY43 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CHMP4AQ9BY43 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC7.95□□□□□ -1.14
CHMP4AQ9BY43 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CHMP4AQ9BY43 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CHMP4AQ9BY43 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CHMP4AQ9BY43 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CHMP4AQ9BY43 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
CHMP4AQ9BY43 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC7.95□□□□□ -1.14
CHMP4AQ9BY43 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC7.95□□□□□ -1.14
CHMP4AQ9BY43 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC7.95□□□□□ -1.14
CHMP4AQ9BY43 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
CHMP4AQ9BY43 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC7.95□□□□□ -1.14
CHMP4AQ9BY43 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
CHMP4AQ9BY43 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC7.94□□□□□ -1.14
CHMP4AQ9BY43 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC7.94□□□□□ -1.14
CHMP4AQ9BY43 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC7.94□□□□□ -1.14
CHMP4AQ9BY43 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CHMP4AQ9BY43 TEK-202ENST00000406359 3935 ntTSL 2 BASIC7.94□□□□□ -1.14
CHMP4AQ9BY43 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
CHMP4AQ9BY43 CASC19-281ENST00000642118 1554 ntBASIC7.94□□□□□ -1.14
CHMP4AQ9BY43 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC7.94□□□□□ -1.14
CHMP4AQ9BY43 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CHMP4AQ9BY43 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
CHMP4AQ9BY43 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
CHMP4AQ9BY43 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CHMP4AQ9BY43 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CHMP4AQ9BY43 AJ239321.1-201ENST00000424255 564 ntBASIC7.94□□□□□ -1.14
CHMP4AQ9BY43 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC7.94□□□□□ -1.14
CHMP4AQ9BY43 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC7.94□□□□□ -1.14
CHMP4AQ9BY43 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC7.94□□□□□ -1.14
CHMP4AQ9BY43 RPL31P20-201ENST00000449593 360 ntBASIC7.94□□□□□ -1.14
CHMP4AQ9BY43 PPIAP27-201ENST00000453800 265 ntBASIC7.94□□□□□ -1.14
CHMP4AQ9BY43 RPL7L1P3-201ENST00000455249 689 ntBASIC7.94□□□□□ -1.14
CHMP4AQ9BY43 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC7.94□□□□□ -1.14
CHMP4AQ9BY43 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC7.94□□□□□ -1.14
CHMP4AQ9BY43 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC7.94□□□□□ -1.14
CHMP4AQ9BY43 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CHMP4AQ9BY43 Y_RNA.710-201ENST00000516975 110 ntBASIC7.94□□□□□ -1.14
CHMP4AQ9BY43 AP003396.4-201ENST00000527574 265 ntBASIC7.94□□□□□ -1.14
CHMP4AQ9BY43 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC7.94□□□□□ -1.14
CHMP4AQ9BY43 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC7.94□□□□□ -1.14
CHMP4AQ9BY43 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC7.94□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms