Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.66□□□□□ -1.5
CLHC1Q8NHS4 RBMY1HP-201ENST00000382759 1389 ntBASIC5.66□□□□□ -1.5
CLHC1Q8NHS4 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CLHC1Q8NHS4 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
CLHC1Q8NHS4 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CLHC1Q8NHS4 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CLHC1Q8NHS4 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CLHC1Q8NHS4 PSG10P-201ENST00000501199 1500 ntBASIC5.65□□□□□ -1.5
CLHC1Q8NHS4 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.65□□□□□ -1.5
CLHC1Q8NHS4 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
CLHC1Q8NHS4 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CLHC1Q8NHS4 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
CLHC1Q8NHS4 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CLHC1Q8NHS4 RN7SKP128-201ENST00000364270 303 ntBASIC5.65□□□□□ -1.5
CLHC1Q8NHS4 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
CLHC1Q8NHS4 MIR191-201ENST00000384873 92 ntBASIC5.65□□□□□ -1.5
CLHC1Q8NHS4 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
CLHC1Q8NHS4 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.65□□□□□ -1.5
CLHC1Q8NHS4 YWHAZP6-201ENST00000399764 738 ntBASIC5.65□□□□□ -1.5
CLHC1Q8NHS4 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.65□□□□□ -1.5
CLHC1Q8NHS4 RN7SKP146-201ENST00000410242 334 ntBASIC5.65□□□□□ -1.5
CLHC1Q8NHS4 RNA5SP198-201ENST00000410376 127 ntBASIC5.65□□□□□ -1.5
CLHC1Q8NHS4 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.65□□□□□ -1.5
CLHC1Q8NHS4 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.65□□□□□ -1.5
CLHC1Q8NHS4 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.65□□□□□ -1.5
CLHC1Q8NHS4 GAPDHP59-201ENST00000435908 267 ntBASIC5.65□□□□□ -1.5
CLHC1Q8NHS4 KRT8P51-201ENST00000438938 274 ntBASIC5.65□□□□□ -1.5
CLHC1Q8NHS4 RPS7P3-201ENST00000443360 580 ntBASIC5.65□□□□□ -1.5
CLHC1Q8NHS4 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.65□□□□□ -1.5
CLHC1Q8NHS4 PPIAP7-201ENST00000454070 489 ntBASIC5.65□□□□□ -1.5
CLHC1Q8NHS4 RPL12P39-201ENST00000455456 496 ntBASIC5.65□□□□□ -1.5
CLHC1Q8NHS4 AC079080.1-201ENST00000479841 822 ntBASIC5.65□□□□□ -1.5
CLHC1Q8NHS4 OR7E99P-201ENST00000505750 922 ntBASIC5.65□□□□□ -1.5
CLHC1Q8NHS4 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.65□□□□□ -1.5
CLHC1Q8NHS4 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.65□□□□□ -1.5
CLHC1Q8NHS4 MIR2117-201ENST00000516780 80 ntBASIC5.65□□□□□ -1.5
CLHC1Q8NHS4 AC078899.1-201ENST00000521432 1185 ntBASIC5.65□□□□□ -1.5
CLHC1Q8NHS4 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.65□□□□□ -1.5
CLHC1Q8NHS4 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.65□□□□□ -1.5
CLHC1Q8NHS4 AP000620.1-201ENST00000527147 504 ntBASIC5.65□□□□□ -1.5
CLHC1Q8NHS4 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.65□□□□□ -1.5
CLHC1Q8NHS4 TXNP4-201ENST00000575018 310 ntBASIC5.65□□□□□ -1.5
CLHC1Q8NHS4 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.65□□□□□ -1.5
CLHC1Q8NHS4 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.65□□□□□ -1.5
CLHC1Q8NHS4 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.65□□□□□ -1.5
CLHC1Q8NHS4 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.65□□□□□ -1.5
CLHC1Q8NHS4 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.65□□□□□ -1.5
CLHC1Q8NHS4 AL355974.3-201ENST00000617383 467 ntBASIC5.65□□□□□ -1.5
CLHC1Q8NHS4 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CLHC1Q8NHS4 AC099654.6-201ENST00000636487 512 ntBASIC5.65□□□□□ -1.5
CLHC1Q8NHS4 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CLHC1Q8NHS4 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
CLHC1Q8NHS4 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CLHC1Q8NHS4 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CLHC1Q8NHS4 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CLHC1Q8NHS4 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
CLHC1Q8NHS4 AC093671.1-201ENST00000624981 2929 ntBASIC5.64□□□□□ -1.51
CLHC1Q8NHS4 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
CLHC1Q8NHS4 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CLHC1Q8NHS4 AC025470.1-201ENST00000510053 2032 ntBASIC5.64□□□□□ -1.51
CLHC1Q8NHS4 AC004076.2-201ENST00000620532 3323 ntBASIC5.64□□□□□ -1.51
CLHC1Q8NHS4 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CLHC1Q8NHS4 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CLHC1Q8NHS4 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CLHC1Q8NHS4 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
CLHC1Q8NHS4 AL139158.1-201ENST00000424719 340 ntBASIC5.64□□□□□ -1.51
CLHC1Q8NHS4 PRUNEP1-201ENST00000425846 705 ntBASIC5.64□□□□□ -1.51
CLHC1Q8NHS4 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.64□□□□□ -1.51
CLHC1Q8NHS4 AC108479.1-201ENST00000431142 427 ntBASIC5.64□□□□□ -1.51
CLHC1Q8NHS4 AC096632.2-201ENST00000438139 1239 ntBASIC5.64□□□□□ -1.51
CLHC1Q8NHS4 AL353662.1-201ENST00000439099 327 ntBASIC5.64□□□□□ -1.51
CLHC1Q8NHS4 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.64□□□□□ -1.51
CLHC1Q8NHS4 AC093719.1-201ENST00000480427 441 ntBASIC5.64□□□□□ -1.51
CLHC1Q8NHS4 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CLHC1Q8NHS4 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.64□□□□□ -1.51
CLHC1Q8NHS4 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
CLHC1Q8NHS4 AC113367.2-201ENST00000505749 160 ntBASIC5.64□□□□□ -1.51
CLHC1Q8NHS4 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.64□□□□□ -1.51
CLHC1Q8NHS4 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC5.64□□□□□ -1.51
CLHC1Q8NHS4 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.64□□□□□ -1.51
CLHC1Q8NHS4 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC5.64□□□□□ -1.51
CLHC1Q8NHS4 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
CLHC1Q8NHS4 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.64□□□□□ -1.51
CLHC1Q8NHS4 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.64□□□□□ -1.51
CLHC1Q8NHS4 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.64□□□□□ -1.51
CLHC1Q8NHS4 GARSP1-201ENST00000570895 719 ntBASIC5.64□□□□□ -1.51
CLHC1Q8NHS4 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.64□□□□□ -1.51
CLHC1Q8NHS4 MIR4701-201ENST00000583094 63 ntBASIC5.64□□□□□ -1.51
CLHC1Q8NHS4 AC005479.3-201ENST00000602790 431 ntBASIC5.64□□□□□ -1.51
CLHC1Q8NHS4 AC093388.1-201ENST00000609166 430 ntBASIC5.64□□□□□ -1.51
CLHC1Q8NHS4 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.64□□□□□ -1.51
CLHC1Q8NHS4 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.64□□□□□ -1.51
CLHC1Q8NHS4 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
CLHC1Q8NHS4 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.64□□□□□ -1.51
CLHC1Q8NHS4 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CLHC1Q8NHS4 CDC27P2-201ENST00000425026 1922 ntBASIC5.64□□□□□ -1.51
CLHC1Q8NHS4 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
CLHC1Q8NHS4 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.64□□□□□ -1.51
CLHC1Q8NHS4 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
CLHC1Q8NHS4 AC011503.2-201ENST00000594230 1500 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms