Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC2.08□□□□□ -2.08
Rnf180Q3U827 Mir3471-1-201ENSMUST00000175139 131 ntBASIC2.07□□□□□ -2.08
Rnf180Q3U827 Mir7079-201ENSMUST00000184697 69 ntBASIC2.07□□□□□ -2.08
Rnf180Q3U827 AC125488.1-201ENSMUST00000219586 212 ntBASIC2.07□□□□□ -2.08
Rnf180Q3U827 Gm25855-201ENSMUST00000082787 72 ntBASIC2.07□□□□□ -2.08
Rnf180Q3U827 Gm23100-201ENSMUST00000083455 141 ntBASIC2.07□□□□□ -2.08
Rnf180Q3U827 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Rnf180Q3U827 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Rnf180Q3U827 Gm26084-201ENSMUST00000157903 104 ntBASIC2.06□□□□□ -2.08
Rnf180Q3U827 Mir3057-201ENSMUST00000175040 91 ntBASIC2.06□□□□□ -2.08
Rnf180Q3U827 Gm25958-201ENSMUST00000175114 71 ntBASIC2.06□□□□□ -2.08
Rnf180Q3U827 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC2.06□□□□□ -2.08
Rnf180Q3U827 Gm24705-201ENSMUST00000082808 107 ntBASIC2.06□□□□□ -2.08
Rnf180Q3U827 Mir223-201ENSMUST00000102112 110 ntBASIC2.05□□□□□ -2.08
Rnf180Q3U827 Mir880-201ENSMUST00000104809 78 ntBASIC2.05□□□□□ -2.08
Rnf180Q3U827 Gm11856-201ENSMUST00000118712 276 ntBASIC2.05□□□□□ -2.08
Rnf180Q3U827 Gm16186-201ENSMUST00000120132 216 ntBASIC2.05□□□□□ -2.08
Rnf180Q3U827 Gm15692-201ENSMUST00000152173 352 ntBASIC2.05□□□□□ -2.08
Rnf180Q3U827 Gm23469-201ENSMUST00000157131 104 ntBASIC2.05□□□□□ -2.08
Rnf180Q3U827 Gm23208-201ENSMUST00000158666 127 ntBASIC2.05□□□□□ -2.08
Rnf180Q3U827 Gm24366-201ENSMUST00000175383 86 ntBASIC2.05□□□□□ -2.08
Rnf180Q3U827 Gm25035-201ENSMUST00000175414 77 ntBASIC2.05□□□□□ -2.08
Rnf180Q3U827 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Rnf180Q3U827 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC2.05□□□□□ -2.08
Rnf180Q3U827 Gm24805-201ENSMUST00000082931 104 ntBASIC2.05□□□□□ -2.08
Rnf180Q3U827 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Rnf180Q3U827 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Rnf180Q3U827 Gm44489-201ENSMUST00000104619 97 ntBASIC2.04□□□□□ -2.08
Rnf180Q3U827 Gm14568-201ENSMUST00000119321 294 ntBASIC2.04□□□□□ -2.08
Rnf180Q3U827 Gm15067-201ENSMUST00000119534 156 ntBASIC2.04□□□□□ -2.08
Rnf180Q3U827 Gm26091-201ENSMUST00000122704 82 ntBASIC2.04□□□□□ -2.08
Rnf180Q3U827 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC2.04□□□□□ -2.08
Rnf180Q3U827 Gm38298-201ENSMUST00000193578 118 ntBASIC2.04□□□□□ -2.08
Rnf180Q3U827 Mir10b-201ENSMUST00000083566 68 ntBASIC2.04□□□□□ -2.08
Rnf180Q3U827 Gm22494-201ENSMUST00000104495 128 ntBASIC2.03□□□□□ -2.08
Rnf180Q3U827 Gm23996-201ENSMUST00000158062 131 ntBASIC2.03□□□□□ -2.08
Rnf180Q3U827 Gm27517-201ENSMUST00000184347 236 ntBASIC2.03□□□□□ -2.08
Rnf180Q3U827 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC2.03□□□□□ -2.08
Rnf180Q3U827 Mir221-201ENSMUST00000083488 95 ntBASIC2.03□□□□□ -2.08
Rnf180Q3U827 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC2.03□□□□□ -2.08
Rnf180Q3U827 Gm43484-201ENSMUST00000198333 5966 ntBASIC2.03□□□□□ -2.09
Rnf180Q3U827 Gm26421-201ENSMUST00000104279 132 ntBASIC2.02□□□□□ -2.09
Rnf180Q3U827 Gm25750-201ENSMUST00000175483 112 ntBASIC2.02□□□□□ -2.09
Rnf180Q3U827 Mir669j-201ENSMUST00000179023 121 ntBASIC2.02□□□□□ -2.09
Rnf180Q3U827 AC124739.2-201ENSMUST00000222201 109 ntBASIC2.02□□□□□ -2.09
Rnf180Q3U827 Gm42718-201ENSMUST00000197319 2681 ntBASIC2.01□□□□□ -2.09
Rnf180Q3U827 Gm22340-201ENSMUST00000157717 114 ntBASIC2.01□□□□□ -2.09
Rnf180Q3U827 Gm23783-201ENSMUST00000157941 102 ntBASIC2.01□□□□□ -2.09
Rnf180Q3U827 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
Rnf180Q3U827 mt-Tt-201ENSMUST00000082422 67 ntBASIC2.01□□□□□ -2.09
Rnf180Q3U827 Snora20-201ENSMUST00000082703 128 ntBASIC2.01□□□□□ -2.09
Rnf180Q3U827 Gm24151-201ENSMUST00000082758 141 ntBASIC2.01□□□□□ -2.09
Rnf180Q3U827 Gm23509-201ENSMUST00000083080 160 ntBASIC2.01□□□□□ -2.09
Rnf180Q3U827 Mir196b-201ENSMUST00000083509 85 ntBASIC2.01□□□□□ -2.09
Rnf180Q3U827 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Rnf180Q3U827 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
Rnf180Q3U827 Mir3096-201ENSMUST00000116685 71 ntBASIC2□□□□□ -2.09
Rnf180Q3U827 Gm22083-201ENSMUST00000157586 102 ntBASIC2□□□□□ -2.09
Rnf180Q3U827 Gm22079-201ENSMUST00000157592 106 ntBASIC2□□□□□ -2.09
Rnf180Q3U827 Gm26029-201ENSMUST00000158659 132 ntBASIC2□□□□□ -2.09
Rnf180Q3U827 Gm27511-201ENSMUST00000183502 127 ntBASIC2□□□□□ -2.09
Rnf180Q3U827 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Rnf180Q3U827 Gm14674-201ENSMUST00000117816 342 ntBASIC1.99□□□□□ -2.09
Rnf180Q3U827 Gm14946-201ENSMUST00000119859 296 ntBASIC1.99□□□□□ -2.09
Rnf180Q3U827 Gm26213-201ENSMUST00000158582 110 ntBASIC1.99□□□□□ -2.09
Rnf180Q3U827 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC1.99□□□□□ -2.09
Rnf180Q3U827 CT033781.2-201ENSMUST00000221113 153 ntBASIC1.99□□□□□ -2.09
Rnf180Q3U827 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.99□□□□□ -2.09
Rnf180Q3U827 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
Rnf180Q3U827 Gm22796-201ENSMUST00000157234 106 ntBASIC1.98□□□□□ -2.09
Rnf180Q3U827 Gm23122-201ENSMUST00000157645 103 ntBASIC1.98□□□□□ -2.09
Rnf180Q3U827 Mir7657-201ENSMUST00000196051 57 ntBASIC1.98□□□□□ -2.09
Rnf180Q3U827 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Rnf180Q3U827 Gm42855-201ENSMUST00000197388 253 ntBASIC1.98□□□□□ -2.09
Rnf180Q3U827 Snord14a-201ENSMUST00000082807 87 ntBASIC1.98□□□□□ -2.09
Rnf180Q3U827 Gm22884-201ENSMUST00000083127 140 ntBASIC1.98□□□□□ -2.09
Rnf180Q3U827 Gm25416-201ENSMUST00000104221 107 ntBASIC1.97□□□□□ -2.09
Rnf180Q3U827 Gm25879-201ENSMUST00000104330 107 ntBASIC1.97□□□□□ -2.09
Rnf180Q3U827 Gm12309-201ENSMUST00000119889 182 ntBASIC1.97□□□□□ -2.09
Rnf180Q3U827 Gm24250-201ENSMUST00000157320 135 ntBASIC1.97□□□□□ -2.09
Rnf180Q3U827 Gm24718-201ENSMUST00000157521 136 ntBASIC1.97□□□□□ -2.09
Rnf180Q3U827 Gm26090-201ENSMUST00000157897 128 ntBASIC1.97□□□□□ -2.09
Rnf180Q3U827 Gm23770-201ENSMUST00000178009 108 ntBASIC1.97□□□□□ -2.09
Rnf180Q3U827 Gm22832-201ENSMUST00000178022 108 ntBASIC1.97□□□□□ -2.09
Rnf180Q3U827 Gm23863-201ENSMUST00000178265 108 ntBASIC1.97□□□□□ -2.09
Rnf180Q3U827 Gm24828-201ENSMUST00000178507 108 ntBASIC1.97□□□□□ -2.09
Rnf180Q3U827 Gm23052-201ENSMUST00000178633 108 ntBASIC1.97□□□□□ -2.09
Rnf180Q3U827 Gm25729-201ENSMUST00000179050 108 ntBASIC1.97□□□□□ -2.09
Rnf180Q3U827 Gm25359-201ENSMUST00000179315 108 ntBASIC1.97□□□□□ -2.09
Rnf180Q3U827 Gm22624-201ENSMUST00000179913 108 ntBASIC1.97□□□□□ -2.09
Rnf180Q3U827 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.97□□□□□ -2.09
Rnf180Q3U827 Mir451a-201ENSMUST00000093557 72 ntBASIC1.97□□□□□ -2.09
Rnf180Q3U827 Gm26076-201ENSMUST00000104065 105 ntBASIC1.96□□□□□ -2.1
Rnf180Q3U827 Gm23170-201ENSMUST00000157158 106 ntBASIC1.96□□□□□ -2.1
Rnf180Q3U827 Gm24246-201ENSMUST00000157315 132 ntBASIC1.96□□□□□ -2.1
Rnf180Q3U827 U6.1-201ENSMUST00000157443 101 ntBASIC1.96□□□□□ -2.1
Rnf180Q3U827 Mir6928-201ENSMUST00000185166 70 ntBASIC1.96□□□□□ -2.1
Rnf180Q3U827 Gm28383-201ENSMUST00000187563 139 ntBASIC1.96□□□□□ -2.1
Rnf180Q3U827 Gm8508-201ENSMUST00000061226 363 ntBASIC1.96□□□□□ -2.1
Rnf180Q3U827 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 156.4 ms