Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 Mir467a-3-201ENSMUST00000178082 83 ntBASIC1.71□□□□□ -2.14
Col28a1Q2UY11 Mir467a-7-201ENSMUST00000178635 83 ntBASIC1.71□□□□□ -2.14
Col28a1Q2UY11 Mir467a-10-201ENSMUST00000179320 83 ntBASIC1.71□□□□□ -2.14
Col28a1Q2UY11 Mir467a-5-201ENSMUST00000179352 83 ntBASIC1.71□□□□□ -2.14
Col28a1Q2UY11 Mir467a-2-201ENSMUST00000179447 83 ntBASIC1.71□□□□□ -2.14
Col28a1Q2UY11 Mir467a-9-201ENSMUST00000179752 83 ntBASIC1.71□□□□□ -2.14
Col28a1Q2UY11 Mir467a-4-201ENSMUST00000179923 83 ntBASIC1.71□□□□□ -2.14
Col28a1Q2UY11 Mir467a-8-201ENSMUST00000180070 83 ntBASIC1.71□□□□□ -2.14
Col28a1Q2UY11 Mir7679-201ENSMUST00000183379 63 ntBASIC1.71□□□□□ -2.14
Col28a1Q2UY11 Mir6376-201ENSMUST00000185149 131 ntBASIC1.71□□□□□ -2.14
Col28a1Q2UY11 Sult1c2-ps2-201ENSMUST00000196414 276 ntBASIC1.71□□□□□ -2.14
Col28a1Q2UY11 Mir7021-201ENSMUST00000197026 63 ntBASIC1.71□□□□□ -2.14
Col28a1Q2UY11 Mir3961-201ENSMUST00000198795 59 ntBASIC1.71□□□□□ -2.14
Col28a1Q2UY11 Gm42960-201ENSMUST00000202160 241 ntBASIC1.71□□□□□ -2.14
Col28a1Q2UY11 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Col28a1Q2UY11 Gm26339-201ENSMUST00000102368 99 ntBASIC1.7□□□□□ -2.14
Col28a1Q2UY11 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC1.7□□□□□ -2.14
Col28a1Q2UY11 Mir3094-201ENSMUST00000175121 64 ntBASIC1.7□□□□□ -2.14
Col28a1Q2UY11 Gm23714-201ENSMUST00000179259 105 ntBASIC1.7□□□□□ -2.14
Col28a1Q2UY11 Gm45429-201ENSMUST00000209527 172 ntBASIC1.7□□□□□ -2.14
Col28a1Q2UY11 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC1.7□□□□□ -2.14
Col28a1Q2UY11 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
Col28a1Q2UY11 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
Col28a1Q2UY11 Gm26421-201ENSMUST00000104279 132 ntBASIC1.69□□□□□ -2.14
Col28a1Q2UY11 Gm23654-201ENSMUST00000116758 126 ntBASIC1.69□□□□□ -2.14
Col28a1Q2UY11 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.69□□□□□ -2.14
Col28a1Q2UY11 Gm23854-201ENSMUST00000158378 108 ntBASIC1.69□□□□□ -2.14
Col28a1Q2UY11 Trav5d-3-201ENSMUST00000170041 270 ntBASIC1.69□□□□□ -2.14
Col28a1Q2UY11 Gm44325-201ENSMUST00000196757 77 ntBASIC1.69□□□□□ -2.14
Col28a1Q2UY11 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC1.69□□□□□ -2.14
Col28a1Q2UY11 mt-Tv-201ENSMUST00000082389 69 ntBASIC1.69□□□□□ -2.14
Col28a1Q2UY11 Gm25697-201ENSMUST00000082902 98 ntBASIC1.69□□□□□ -2.14
Col28a1Q2UY11 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Col28a1Q2UY11 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.68□□□□□ -2.14
Col28a1Q2UY11 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Col28a1Q2UY11 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Col28a1Q2UY11 Gm26498-201ENSMUST00000177799 79 ntBASIC1.68□□□□□ -2.14
Col28a1Q2UY11 Gm26230-201ENSMUST00000180141 79 ntBASIC1.68□□□□□ -2.14
Col28a1Q2UY11 Gm27446-201ENSMUST00000183963 89 ntBASIC1.68□□□□□ -2.14
Col28a1Q2UY11 Mir6928-201ENSMUST00000185166 70 ntBASIC1.68□□□□□ -2.14
Col28a1Q2UY11 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC1.68□□□□□ -2.14
Col28a1Q2UY11 AC136457.1-201ENSMUST00000224195 156 ntBASIC1.68□□□□□ -2.14
Col28a1Q2UY11 AC126939.1-201ENSMUST00000224943 226 ntBASIC1.68□□□□□ -2.14
Col28a1Q2UY11 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Col28a1Q2UY11 Gm44578-201ENSMUST00000207236 3835 ntBASIC1.67□□□□□ -2.14
Col28a1Q2UY11 Gm25832-201ENSMUST00000104140 130 ntBASIC1.67□□□□□ -2.14
Col28a1Q2UY11 Mir3096-201ENSMUST00000116685 71 ntBASIC1.67□□□□□ -2.14
Col28a1Q2UY11 Gm24913-201ENSMUST00000157286 107 ntBASIC1.67□□□□□ -2.14
Col28a1Q2UY11 Gm24250-201ENSMUST00000157320 135 ntBASIC1.67□□□□□ -2.14
Col28a1Q2UY11 Gm25978-201ENSMUST00000158698 90 ntBASIC1.67□□□□□ -2.14
Col28a1Q2UY11 Gm23770-201ENSMUST00000178009 108 ntBASIC1.67□□□□□ -2.14
Col28a1Q2UY11 Gm22832-201ENSMUST00000178022 108 ntBASIC1.67□□□□□ -2.14
Col28a1Q2UY11 Gm23863-201ENSMUST00000178265 108 ntBASIC1.67□□□□□ -2.14
Col28a1Q2UY11 Gm24828-201ENSMUST00000178507 108 ntBASIC1.67□□□□□ -2.14
Col28a1Q2UY11 Gm23052-201ENSMUST00000178633 108 ntBASIC1.67□□□□□ -2.14
Col28a1Q2UY11 Gm25729-201ENSMUST00000179050 108 ntBASIC1.67□□□□□ -2.14
Col28a1Q2UY11 Gm25359-201ENSMUST00000179315 108 ntBASIC1.67□□□□□ -2.14
Col28a1Q2UY11 Gm22624-201ENSMUST00000179913 108 ntBASIC1.67□□□□□ -2.14
Col28a1Q2UY11 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC1.67□□□□□ -2.14
Col28a1Q2UY11 Gm19855-201ENSMUST00000210145 249 ntBASIC1.67□□□□□ -2.14
Col28a1Q2UY11 Gm45544-201ENSMUST00000211130 88 ntBASIC1.67□□□□□ -2.14
Col28a1Q2UY11 Gm22283-201ENSMUST00000082556 161 ntBASIC1.67□□□□□ -2.14
Col28a1Q2UY11 Gm25357-201ENSMUST00000082745 72 ntBASIC1.67□□□□□ -2.14
Col28a1Q2UY11 Gm22950-201ENSMUST00000082776 107 ntBASIC1.67□□□□□ -2.14
Col28a1Q2UY11 Gm22251-201ENSMUST00000083216 107 ntBASIC1.67□□□□□ -2.14
Col28a1Q2UY11 Gm24468-201ENSMUST00000104489 104 ntBASIC1.66□□□□□ -2.14
Col28a1Q2UY11 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC1.66□□□□□ -2.14
Col28a1Q2UY11 Gm22768-201ENSMUST00000158366 153 ntBASIC1.66□□□□□ -2.14
Col28a1Q2UY11 Gm28270-201ENSMUST00000188550 109 ntBASIC1.66□□□□□ -2.14
Col28a1Q2UY11 Gm28328-201ENSMUST00000188869 109 ntBASIC1.66□□□□□ -2.14
Col28a1Q2UY11 Gm23038-201ENSMUST00000083873 104 ntBASIC1.66□□□□□ -2.14
Col28a1Q2UY11 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
Col28a1Q2UY11 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC1.66□□□□□ -2.14
Col28a1Q2UY11 Gm26076-201ENSMUST00000104065 105 ntBASIC1.65□□□□□ -2.15
Col28a1Q2UY11 n-R5s73-201ENSMUST00000122508 107 ntBASIC1.65□□□□□ -2.15
Col28a1Q2UY11 U6.1-201ENSMUST00000157443 101 ntBASIC1.65□□□□□ -2.15
Col28a1Q2UY11 Gm26004-201ENSMUST00000158804 116 ntBASIC1.65□□□□□ -2.15
Col28a1Q2UY11 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.65□□□□□ -2.15
Col28a1Q2UY11 Mir7678-201ENSMUST00000185076 71 ntBASIC1.65□□□□□ -2.15
Col28a1Q2UY11 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC1.65□□□□□ -2.15
Col28a1Q2UY11 mt-Ts2-201ENSMUST00000082416 59 ntBASIC1.65□□□□□ -2.15
Col28a1Q2UY11 Gm23507-201ENSMUST00000083078 107 ntBASIC1.65□□□□□ -2.15
Col28a1Q2UY11 Mir7-1-201ENSMUST00000083500 108 ntBASIC1.65□□□□□ -2.15
Col28a1Q2UY11 Gm24261-201ENSMUST00000083744 104 ntBASIC1.65□□□□□ -2.15
Col28a1Q2UY11 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
Col28a1Q2UY11 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC1.64□□□□□ -2.15
Col28a1Q2UY11 Gm22603-201ENSMUST00000157603 96 ntBASIC1.64□□□□□ -2.15
Col28a1Q2UY11 Gm22332-201ENSMUST00000158072 126 ntBASIC1.64□□□□□ -2.15
Col28a1Q2UY11 Gm25658-201ENSMUST00000158472 128 ntBASIC1.64□□□□□ -2.15
Col28a1Q2UY11 Gm24345-201ENSMUST00000158706 124 ntBASIC1.64□□□□□ -2.15
Col28a1Q2UY11 Gm22638-201ENSMUST00000179674 107 ntBASIC1.64□□□□□ -2.15
Col28a1Q2UY11 Mir6377-201ENSMUST00000183760 114 ntBASIC1.64□□□□□ -2.15
Col28a1Q2UY11 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.64□□□□□ -2.15
Col28a1Q2UY11 Gm23370-201ENSMUST00000199545 130 ntBASIC1.64□□□□□ -2.15
Col28a1Q2UY11 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC1.64□□□□□ -2.15
Col28a1Q2UY11 Gm24151-201ENSMUST00000082758 141 ntBASIC1.64□□□□□ -2.15
Col28a1Q2UY11 Mir300-201ENSMUST00000083485 79 ntBASIC1.64□□□□□ -2.15
Col28a1Q2UY11 AC122828.3-201ENSMUST00000223019 3915 ntBASIC1.64□□□□□ -2.15
Col28a1Q2UY11 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Col28a1Q2UY11 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.63□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 134 ms