Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm42795-201ENSMUST00000198847 76 ntBASIC3.02□□□□□ -1.93
Trim47Q8C0E3 Gm24918-201ENSMUST00000083022 130 ntBASIC3.02□□□□□ -1.93
Trim47Q8C0E3 AL645643.1-201ENSMUST00000222438 3897 ntBASIC3.01□□□□□ -1.93
Trim47Q8C0E3 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Trim47Q8C0E3 Mir466k-201ENSMUST00000116774 122 ntBASIC3.01□□□□□ -1.93
Trim47Q8C0E3 Gm6954-201ENSMUST00000117416 225 ntBASIC3.01□□□□□ -1.93
Trim47Q8C0E3 Gm26369-201ENSMUST00000157825 100 ntBASIC3.01□□□□□ -1.93
Trim47Q8C0E3 Gm22089-201ENSMUST00000158336 102 ntBASIC3.01□□□□□ -1.93
Trim47Q8C0E3 Gm23181-201ENSMUST00000158685 110 ntBASIC3.01□□□□□ -1.93
Trim47Q8C0E3 AC174457.1-201ENSMUST00000215932 226 ntBASIC3.01□□□□□ -1.93
Trim47Q8C0E3 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Trim47Q8C0E3 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Trim47Q8C0E3 AC122828.3-201ENSMUST00000223019 3915 ntBASIC3.01□□□□□ -1.93
Trim47Q8C0E3 Gm37566-201ENSMUST00000192363 4355 ntBASIC3□□□□□ -1.93
Trim47Q8C0E3 Gm26247-201ENSMUST00000116702 91 ntBASIC3□□□□□ -1.93
Trim47Q8C0E3 Gm27786-201ENSMUST00000184337 70 ntBASIC3□□□□□ -1.93
Trim47Q8C0E3 mt-Tn-201ENSMUST00000082399 71 ntBASIC3□□□□□ -1.93
Trim47Q8C0E3 Gm26277-201ENSMUST00000157097 152 ntBASIC2.99□□□□□ -1.93
Trim47Q8C0E3 Gm23390-201ENSMUST00000157393 106 ntBASIC2.99□□□□□ -1.93
Trim47Q8C0E3 Gm22330-201ENSMUST00000158068 115 ntBASIC2.99□□□□□ -1.93
Trim47Q8C0E3 Gm22731-201ENSMUST00000158086 94 ntBASIC2.99□□□□□ -1.93
Trim47Q8C0E3 Gm22140-201ENSMUST00000158745 120 ntBASIC2.99□□□□□ -1.93
Trim47Q8C0E3 Gm44807-201ENSMUST00000206115 154 ntBASIC2.99□□□□□ -1.93
Trim47Q8C0E3 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Trim47Q8C0E3 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Trim47Q8C0E3 Gm37515-201ENSMUST00000193321 3817 ntBASIC2.99□□□□□ -1.93
Trim47Q8C0E3 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Trim47Q8C0E3 Mir542-201ENSMUST00000102186 85 ntBASIC2.98□□□□□ -1.93
Trim47Q8C0E3 Gm24064-201ENSMUST00000157486 106 ntBASIC2.98□□□□□ -1.93
Trim47Q8C0E3 Snord53-201ENSMUST00000175146 78 ntBASIC2.98□□□□□ -1.93
Trim47Q8C0E3 Gm42807-201ENSMUST00000200141 329 ntBASIC2.98□□□□□ -1.93
Trim47Q8C0E3 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Trim47Q8C0E3 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.98□□□□□ -1.93
Trim47Q8C0E3 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Trim47Q8C0E3 Gm22782-201ENSMUST00000104082 132 ntBASIC2.97□□□□□ -1.93
Trim47Q8C0E3 Gm23470-201ENSMUST00000157129 120 ntBASIC2.97□□□□□ -1.93
Trim47Q8C0E3 Gm24291-201ENSMUST00000157633 162 ntBASIC2.97□□□□□ -1.93
Trim47Q8C0E3 Gm22500-201ENSMUST00000158982 99 ntBASIC2.97□□□□□ -1.93
Trim47Q8C0E3 Mir6405-201ENSMUST00000184584 124 ntBASIC2.97□□□□□ -1.93
Trim47Q8C0E3 Gm45386-201ENSMUST00000210194 218 ntBASIC2.97□□□□□ -1.93
Trim47Q8C0E3 Mir30c-2-201ENSMUST00000083633 84 ntBASIC2.97□□□□□ -1.93
Trim47Q8C0E3 Mir1a-1-201ENSMUST00000093635 77 ntBASIC2.97□□□□□ -1.93
Trim47Q8C0E3 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
Trim47Q8C0E3 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Trim47Q8C0E3 Gm26478-201ENSMUST00000122611 133 ntBASIC2.96□□□□□ -1.94
Trim47Q8C0E3 Gm16355-201ENSMUST00000128606 231 ntBASIC2.96□□□□□ -1.94
Trim47Q8C0E3 Gm22651-201ENSMUST00000157872 94 ntBASIC2.96□□□□□ -1.94
Trim47Q8C0E3 Gm26090-201ENSMUST00000157897 128 ntBASIC2.96□□□□□ -1.94
Trim47Q8C0E3 Mir5118-201ENSMUST00000175551 67 ntBASIC2.96□□□□□ -1.94
Trim47Q8C0E3 Mir6905-201ENSMUST00000184228 70 ntBASIC2.96□□□□□ -1.94
Trim47Q8C0E3 Mir301-201ENSMUST00000083655 86 ntBASIC2.96□□□□□ -1.94
Trim47Q8C0E3 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Trim47Q8C0E3 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Trim47Q8C0E3 Gm1980-201ENSMUST00000123131 2306 ntBASIC2.96□□□□□ -1.94
Trim47Q8C0E3 Gm26339-201ENSMUST00000102368 99 ntBASIC2.95□□□□□ -1.94
Trim47Q8C0E3 Gm25417-201ENSMUST00000104212 131 ntBASIC2.95□□□□□ -1.94
Trim47Q8C0E3 Gm24988-201ENSMUST00000104460 121 ntBASIC2.95□□□□□ -1.94
Trim47Q8C0E3 Gm22815-201ENSMUST00000157451 62 ntBASIC2.95□□□□□ -1.94
Trim47Q8C0E3 Gm20718-201ENSMUST00000176058 259 ntBASIC2.95□□□□□ -1.94
Trim47Q8C0E3 Gm42935-201ENSMUST00000202004 151 ntBASIC2.95□□□□□ -1.94
Trim47Q8C0E3 Gm45452-201ENSMUST00000210905 177 ntBASIC2.95□□□□□ -1.94
Trim47Q8C0E3 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC2.95□□□□□ -1.94
Trim47Q8C0E3 Gm25855-201ENSMUST00000082787 72 ntBASIC2.95□□□□□ -1.94
Trim47Q8C0E3 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Trim47Q8C0E3 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
Trim47Q8C0E3 Gm22205-201ENSMUST00000122655 71 ntBASIC2.94□□□□□ -1.94
Trim47Q8C0E3 Gm25153-201ENSMUST00000157118 156 ntBASIC2.94□□□□□ -1.94
Trim47Q8C0E3 Gm24922-201ENSMUST00000158511 102 ntBASIC2.94□□□□□ -1.94
Trim47Q8C0E3 Gm23409-201ENSMUST00000158516 237 ntBASIC2.94□□□□□ -1.94
Trim47Q8C0E3 Gm25711-201ENSMUST00000158633 128 ntBASIC2.94□□□□□ -1.94
Trim47Q8C0E3 Gm16307-201ENSMUST00000161269 210 ntBASIC2.94□□□□□ -1.94
Trim47Q8C0E3 Gm24082-201ENSMUST00000175175 83 ntBASIC2.94□□□□□ -1.94
Trim47Q8C0E3 Mir3076-201ENSMUST00000175415 60 ntBASIC2.94□□□□□ -1.94
Trim47Q8C0E3 Gm27527-201ENSMUST00000183903 99 ntBASIC2.94□□□□□ -1.94
Trim47Q8C0E3 Gm19855-201ENSMUST00000210145 249 ntBASIC2.94□□□□□ -1.94
Trim47Q8C0E3 Gm45471-201ENSMUST00000211270 281 ntBASIC2.94□□□□□ -1.94
Trim47Q8C0E3 Mir410-201ENSMUST00000083563 81 ntBASIC2.94□□□□□ -1.94
Trim47Q8C0E3 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Trim47Q8C0E3 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Trim47Q8C0E3 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Trim47Q8C0E3 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Trim47Q8C0E3 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
Trim47Q8C0E3 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Trim47Q8C0E3 Gm24670-201ENSMUST00000104154 132 ntBASIC2.93□□□□□ -1.94
Trim47Q8C0E3 Gm23785-201ENSMUST00000116741 96 ntBASIC2.93□□□□□ -1.94
Trim47Q8C0E3 Gm14884-201ENSMUST00000120456 196 ntBASIC2.93□□□□□ -1.94
Trim47Q8C0E3 Gm24736-201ENSMUST00000158862 130 ntBASIC2.93□□□□□ -1.94
Trim47Q8C0E3 Gm20305-201ENSMUST00000193226 177 ntBASIC2.93□□□□□ -1.94
Trim47Q8C0E3 Gm23376-201ENSMUST00000082938 160 ntBASIC2.93□□□□□ -1.94
Trim47Q8C0E3 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Trim47Q8C0E3 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC2.93□□□□□ -1.94
Trim47Q8C0E3 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.92□□□□□ -1.94
Trim47Q8C0E3 Gm7209-201ENSMUST00000122339 333 ntBASIC2.92□□□□□ -1.94
Trim47Q8C0E3 Gm25945-201ENSMUST00000122484 135 ntBASIC2.92□□□□□ -1.94
Trim47Q8C0E3 Gm22858-201ENSMUST00000174972 76 ntBASIC2.92□□□□□ -1.94
Trim47Q8C0E3 Mir5117-201ENSMUST00000083226 84 ntBASIC2.92□□□□□ -1.94
Trim47Q8C0E3 Mir29c-201ENSMUST00000083614 88 ntBASIC2.92□□□□□ -1.94
Trim47Q8C0E3 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Trim47Q8C0E3 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
Trim47Q8C0E3 Mir764-201ENSMUST00000103259 108 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 140.2 ms