Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Mir878-201ENSMUST00000104680 78 ntBASIC2.56□□□□□ -2
Sox1P53783 Gm20409-201ENSMUST00000173457 130 ntBASIC2.56□□□□□ -2
Sox1P53783 Gm23370-201ENSMUST00000199545 130 ntBASIC2.56□□□□□ -2
Sox1P53783 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Sox1P53783 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Sox1P53783 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
Sox1P53783 Gm24238-201ENSMUST00000157792 98 ntBASIC2.55□□□□□ -2
Sox1P53783 Gm22556-201ENSMUST00000157803 100 ntBASIC2.55□□□□□ -2
Sox1P53783 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC2.55□□□□□ -2
Sox1P53783 Gm37602-201ENSMUST00000195187 3310 ntBASIC2.55□□□□□ -2
Sox1P53783 Gm43206-201ENSMUST00000197990 114 ntBASIC2.55□□□□□ -2
Sox1P53783 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC2.55□□□□□ -2
Sox1P53783 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Sox1P53783 Gm6109-201ENSMUST00000223297 348 ntBASIC2.55□□□□□ -2
Sox1P53783 Gm43379-201ENSMUST00000196253 7726 ntBASIC2.55□□□□□ -2
Sox1P53783 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.55□□□□□ -2
Sox1P53783 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.54□□□□□ -2
Sox1P53783 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Sox1P53783 Gm22772-201ENSMUST00000104451 121 ntBASIC2.54□□□□□ -2
Sox1P53783 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.54□□□□□ -2
Sox1P53783 Gm23652-201ENSMUST00000116752 107 ntBASIC2.54□□□□□ -2
Sox1P53783 Gm23083-201ENSMUST00000157851 116 ntBASIC2.54□□□□□ -2
Sox1P53783 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC2.54□□□□□ -2
Sox1P53783 Gm16111-201ENSMUST00000162128 285 ntBASIC2.54□□□□□ -2
Sox1P53783 Gm24638-201ENSMUST00000179807 132 ntBASIC2.54□□□□□ -2
Sox1P53783 Gm29658-201ENSMUST00000185404 230 ntBASIC2.54□□□□□ -2
Sox1P53783 Igkv4-60-201ENSMUST00000200639 358 ntBASIC2.54□□□□□ -2
Sox1P53783 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Sox1P53783 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Sox1P53783 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
Sox1P53783 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC2.53□□□□□ -2
Sox1P53783 Gm22999-201ENSMUST00000157082 88 ntBASIC2.53□□□□□ -2
Sox1P53783 Gm24394-201ENSMUST00000158141 123 ntBASIC2.53□□□□□ -2
Sox1P53783 Gm26073-201ENSMUST00000179906 127 ntBASIC2.53□□□□□ -2
Sox1P53783 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.53□□□□□ -2
Sox1P53783 CT571266.1-201ENSMUST00000222859 153 ntBASIC2.53□□□□□ -2
Sox1P53783 Snora41-201ENSMUST00000082668 132 ntBASIC2.53□□□□□ -2
Sox1P53783 Snora20-201ENSMUST00000082703 128 ntBASIC2.53□□□□□ -2
Sox1P53783 Mir411-201ENSMUST00000083543 82 ntBASIC2.53□□□□□ -2
Sox1P53783 Mir490-201ENSMUST00000093567 84 ntBASIC2.53□□□□□ -2
Sox1P53783 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2.01
Sox1P53783 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Sox1P53783 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Sox1P53783 Snord78-201ENSMUST00000104032 66 ntBASIC2.52□□□□□ -2.01
Sox1P53783 Gm24851-201ENSMUST00000158028 103 ntBASIC2.52□□□□□ -2.01
Sox1P53783 Gm25996-201ENSMUST00000175393 117 ntBASIC2.52□□□□□ -2.01
Sox1P53783 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Sox1P53783 Gm45268-201ENSMUST00000210046 370 ntBASIC2.52□□□□□ -2.01
Sox1P53783 Gm25851-201ENSMUST00000082794 107 ntBASIC2.52□□□□□ -2.01
Sox1P53783 Gm24099-201ENSMUST00000083384 107 ntBASIC2.52□□□□□ -2.01
Sox1P53783 Gm22743-201ENSMUST00000083445 133 ntBASIC2.52□□□□□ -2.01
Sox1P53783 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Sox1P53783 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Sox1P53783 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Sox1P53783 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.51□□□□□ -2.01
Sox1P53783 Gm25090-201ENSMUST00000104000 132 ntBASIC2.51□□□□□ -2.01
Sox1P53783 Gm26253-201ENSMUST00000122493 103 ntBASIC2.51□□□□□ -2.01
Sox1P53783 Gm25289-201ENSMUST00000122799 119 ntBASIC2.51□□□□□ -2.01
Sox1P53783 Gm22330-201ENSMUST00000158068 115 ntBASIC2.51□□□□□ -2.01
Sox1P53783 Gm24947-201ENSMUST00000158334 110 ntBASIC2.51□□□□□ -2.01
Sox1P53783 Gm22888-201ENSMUST00000158640 77 ntBASIC2.51□□□□□ -2.01
Sox1P53783 Gm24333-201ENSMUST00000175101 84 ntBASIC2.51□□□□□ -2.01
Sox1P53783 Gm37515-201ENSMUST00000193321 3817 ntBASIC2.51□□□□□ -2.01
Sox1P53783 Gm23109-201ENSMUST00000116867 126 ntBASIC2.5□□□□□ -2.01
Sox1P53783 Gm14674-201ENSMUST00000117816 342 ntBASIC2.5□□□□□ -2.01
Sox1P53783 n-R5s188-201ENSMUST00000122646 105 ntBASIC2.5□□□□□ -2.01
Sox1P53783 Snord53-201ENSMUST00000175146 78 ntBASIC2.5□□□□□ -2.01
Sox1P53783 Gm25470-201ENSMUST00000175576 111 ntBASIC2.5□□□□□ -2.01
Sox1P53783 Gm24656-201ENSMUST00000177548 132 ntBASIC2.5□□□□□ -2.01
Sox1P53783 AC126691.1-201ENSMUST00000226534 202 ntBASIC2.5□□□□□ -2.01
Sox1P53783 Gm26922-201ENSMUST00000082687 72 ntBASIC2.5□□□□□ -2.01
Sox1P53783 Gm25855-201ENSMUST00000082787 72 ntBASIC2.5□□□□□ -2.01
Sox1P53783 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Sox1P53783 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Sox1P53783 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Sox1P53783 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.49□□□□□ -2.01
Sox1P53783 Gm24049-201ENSMUST00000102409 100 ntBASIC2.49□□□□□ -2.01
Sox1P53783 Gm25887-201ENSMUST00000157777 84 ntBASIC2.49□□□□□ -2.01
Sox1P53783 Snord50a-201ENSMUST00000178154 72 ntBASIC2.49□□□□□ -2.01
Sox1P53783 Gm24463-201ENSMUST00000178417 72 ntBASIC2.49□□□□□ -2.01
Sox1P53783 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Sox1P53783 Mir6388-201ENSMUST00000184417 75 ntBASIC2.49□□□□□ -2.01
Sox1P53783 AC129202.1-201ENSMUST00000224895 526 ntBASIC2.49□□□□□ -2.01
Sox1P53783 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Sox1P53783 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.49□□□□□ -2.01
Sox1P53783 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC2.49□□□□□ -2.01
Sox1P53783 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Sox1P53783 Gm23267-201ENSMUST00000178490 132 ntBASIC2.48□□□□□ -2.01
Sox1P53783 Gm22723-201ENSMUST00000083820 129 ntBASIC2.48□□□□□ -2.01
Sox1P53783 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
Sox1P53783 Gm22033-201ENSMUST00000116947 90 ntBASIC2.47□□□□□ -2.01
Sox1P53783 Gm24076-201ENSMUST00000158179 94 ntBASIC2.47□□□□□ -2.01
Sox1P53783 Gm26466-201ENSMUST00000179615 79 ntBASIC2.47□□□□□ -2.01
Sox1P53783 AC164612.2-202ENSMUST00000216314 253 ntBASIC2.47□□□□□ -2.01
Sox1P53783 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.47□□□□□ -2.01
Sox1P53783 Mir880-201ENSMUST00000104809 78 ntBASIC2.46□□□□□ -2.02
Sox1P53783 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC2.46□□□□□ -2.02
Sox1P53783 Gm23409-201ENSMUST00000158516 237 ntBASIC2.46□□□□□ -2.02
Sox1P53783 Gm45522-201ENSMUST00000210784 166 ntBASIC2.46□□□□□ -2.02
Sox1P53783 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 244.4 ms