Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PTP4A1Q93096 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PTP4A1Q93096 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.59□□□□□ -1.51
PTP4A1Q93096 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
PTP4A1Q93096 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PTP4A1Q93096 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.59□□□□□ -1.51
PTP4A1Q93096 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PTP4A1Q93096 AC027228.2-201ENST00000567141 2154 ntBASIC5.59□□□□□ -1.51
PTP4A1Q93096 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PTP4A1Q93096 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC5.59□□□□□ -1.51
PTP4A1Q93096 AL359976.1-201ENST00000418655 3528 ntBASIC5.59□□□□□ -1.51
PTP4A1Q93096 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
PTP4A1Q93096 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
PTP4A1Q93096 RNU1-84P-201ENST00000365447 164 ntBASIC5.59□□□□□ -1.51
PTP4A1Q93096 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
PTP4A1Q93096 AL033519.1-201ENST00000407266 307 ntBASIC5.59□□□□□ -1.51
PTP4A1Q93096 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.59□□□□□ -1.51
PTP4A1Q93096 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC5.59□□□□□ -1.51
PTP4A1Q93096 AL354868.1-201ENST00000417077 482 ntBASIC5.59□□□□□ -1.51
PTP4A1Q93096 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.59□□□□□ -1.51
PTP4A1Q93096 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PTP4A1Q93096 AL022324.2-201ENST00000434827 780 ntBASIC5.59□□□□□ -1.51
PTP4A1Q93096 MAPRE1P3-201ENST00000435438 796 ntBASIC5.59□□□□□ -1.51
PTP4A1Q93096 RPEP4-201ENST00000437636 602 ntBASIC5.59□□□□□ -1.51
PTP4A1Q93096 UBQLN1P1-207ENST00000441056 1169 ntBASIC5.59□□□□□ -1.51
PTP4A1Q93096 GAPDHP37-201ENST00000442317 968 ntBASIC5.59□□□□□ -1.51
PTP4A1Q93096 AL031681.1-201ENST00000443304 400 ntBASIC5.59□□□□□ -1.51
PTP4A1Q93096 CCRL1P1-201ENST00000449542 1053 ntBASIC5.59□□□□□ -1.51
PTP4A1Q93096 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.59□□□□□ -1.51
PTP4A1Q93096 AC112187.1-201ENST00000455837 479 ntBASIC5.59□□□□□ -1.51
PTP4A1Q93096 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.59□□□□□ -1.51
PTP4A1Q93096 RN7SL393P-201ENST00000463588 296 ntBASIC5.59□□□□□ -1.51
PTP4A1Q93096 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.59□□□□□ -1.51
PTP4A1Q93096 OR9N1P-201ENST00000491296 333 ntBASIC5.59□□□□□ -1.51
PTP4A1Q93096 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.59□□□□□ -1.51
PTP4A1Q93096 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PTP4A1Q93096 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC5.59□□□□□ -1.51
PTP4A1Q93096 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.59□□□□□ -1.51
PTP4A1Q93096 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC5.59□□□□□ -1.51
PTP4A1Q93096 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PTP4A1Q93096 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC5.59□□□□□ -1.51
PTP4A1Q93096 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC5.59□□□□□ -1.51
PTP4A1Q93096 AC008147.3-201ENST00000548666 354 ntBASIC5.59□□□□□ -1.51
PTP4A1Q93096 AC009729.1-201ENST00000548873 1133 ntBASIC5.59□□□□□ -1.51
PTP4A1Q93096 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.59□□□□□ -1.51
PTP4A1Q93096 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.59□□□□□ -1.51
PTP4A1Q93096 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.59□□□□□ -1.51
PTP4A1Q93096 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC5.59□□□□□ -1.51
PTP4A1Q93096 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.59□□□□□ -1.51
PTP4A1Q93096 RN7SL66P-201ENST00000582099 264 ntBASIC5.59□□□□□ -1.51
PTP4A1Q93096 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.59□□□□□ -1.51
PTP4A1Q93096 AL589743.6-201ENST00000611025 117 ntBASIC5.59□□□□□ -1.51
PTP4A1Q93096 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC5.59□□□□□ -1.51
PTP4A1Q93096 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
PTP4A1Q93096 MIR7159-201ENST00000620587 66 ntBASIC5.59□□□□□ -1.51
PTP4A1Q93096 AL731532.1-201ENST00000623972 4236 ntBASIC5.59□□□□□ -1.51
PTP4A1Q93096 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PTP4A1Q93096 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PTP4A1Q93096 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.59□□□□□ -1.51
PTP4A1Q93096 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
PTP4A1Q93096 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.59□□□□□ -1.51
PTP4A1Q93096 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
PTP4A1Q93096 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
PTP4A1Q93096 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.59□□□□□ -1.52
PTP4A1Q93096 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
PTP4A1Q93096 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.59□□□□□ -1.52
PTP4A1Q93096 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
PTP4A1Q93096 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.58□□□□□ -1.52
PTP4A1Q93096 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PTP4A1Q93096 AL136984.1-201ENST00000607611 1893 ntBASIC5.58□□□□□ -1.52
PTP4A1Q93096 AC109446.4-201ENST00000623235 2755 ntBASIC5.58□□□□□ -1.52
PTP4A1Q93096 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PTP4A1Q93096 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PTP4A1Q93096 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PTP4A1Q93096 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PTP4A1Q93096 RNU6-618P-201ENST00000363518 112 ntBASIC5.58□□□□□ -1.52
PTP4A1Q93096 RNU4-7P-201ENST00000364758 141 ntBASIC5.58□□□□□ -1.52
PTP4A1Q93096 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.58□□□□□ -1.52
PTP4A1Q93096 RN7SKP81-201ENST00000365603 331 ntBASIC5.58□□□□□ -1.52
PTP4A1Q93096 MIR551B-201ENST00000384984 96 ntBASIC5.58□□□□□ -1.52
PTP4A1Q93096 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PTP4A1Q93096 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PTP4A1Q93096 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.58□□□□□ -1.52
PTP4A1Q93096 AC013470.3-201ENST00000420252 1194 ntBASIC5.58□□□□□ -1.52
PTP4A1Q93096 GPN3P1-201ENST00000423883 535 ntBASIC5.58□□□□□ -1.52
PTP4A1Q93096 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PTP4A1Q93096 GAPDHP19-201ENST00000431768 1005 ntBASIC5.58□□□□□ -1.52
PTP4A1Q93096 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PTP4A1Q93096 Z85994.2-201ENST00000434327 452 ntBASIC5.58□□□□□ -1.52
PTP4A1Q93096 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PTP4A1Q93096 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.58□□□□□ -1.52
PTP4A1Q93096 AL390879.1-201ENST00000439143 386 ntBASIC5.58□□□□□ -1.52
PTP4A1Q93096 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.58□□□□□ -1.52
PTP4A1Q93096 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC5.58□□□□□ -1.52
PTP4A1Q93096 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.58□□□□□ -1.52
PTP4A1Q93096 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC5.58□□□□□ -1.52
PTP4A1Q93096 RANP2-201ENST00000456833 229 ntBASIC5.58□□□□□ -1.52
PTP4A1Q93096 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PTP4A1Q93096 RN7SL714P-201ENST00000487050 298 ntBASIC5.58□□□□□ -1.52
PTP4A1Q93096 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms