Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Gm28669-201ENSMUST00000188400 100 ntBASIC2.13□□□□□ -2.07
Ushbp1Q8R370 Gm18665-201ENSMUST00000189783 270 ntBASIC2.13□□□□□ -2.07
Ushbp1Q8R370 Gm42719-201ENSMUST00000197393 355 ntBASIC2.13□□□□□ -2.07
Ushbp1Q8R370 Gm24261-201ENSMUST00000083744 104 ntBASIC2.13□□□□□ -2.07
Ushbp1Q8R370 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Ushbp1Q8R370 Gm26074-201ENSMUST00000104063 129 ntBASIC2.12□□□□□ -2.07
Ushbp1Q8R370 Gm24559-201ENSMUST00000157519 121 ntBASIC2.12□□□□□ -2.07
Ushbp1Q8R370 Gm25882-201ENSMUST00000157784 85 ntBASIC2.12□□□□□ -2.07
Ushbp1Q8R370 Mir6950-201ENSMUST00000184438 73 ntBASIC2.12□□□□□ -2.07
Ushbp1Q8R370 Gm44325-201ENSMUST00000196757 77 ntBASIC2.12□□□□□ -2.07
Ushbp1Q8R370 Gm44976-201ENSMUST00000205543 261 ntBASIC2.12□□□□□ -2.07
Ushbp1Q8R370 Gm25697-201ENSMUST00000082902 98 ntBASIC2.12□□□□□ -2.07
Ushbp1Q8R370 Mir201-201ENSMUST00000083470 66 ntBASIC2.12□□□□□ -2.07
Ushbp1Q8R370 Gm24449-201ENSMUST00000083985 106 ntBASIC2.12□□□□□ -2.07
Ushbp1Q8R370 Gm24171-201ENSMUST00000104126 131 ntBASIC2.11□□□□□ -2.07
Ushbp1Q8R370 U6.1-201ENSMUST00000157443 101 ntBASIC2.11□□□□□ -2.07
Ushbp1Q8R370 Gm23813-201ENSMUST00000175153 77 ntBASIC2.11□□□□□ -2.07
Ushbp1Q8R370 Gm23567-201ENSMUST00000178005 107 ntBASIC2.11□□□□□ -2.07
Ushbp1Q8R370 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Ushbp1Q8R370 Gm14917-201ENSMUST00000118872 2105 ntBASIC2.1□□□□□ -2.07
Ushbp1Q8R370 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC2.1□□□□□ -2.07
Ushbp1Q8R370 Gm23898-201ENSMUST00000158111 103 ntBASIC2.1□□□□□ -2.07
Ushbp1Q8R370 Gm23967-201ENSMUST00000175062 78 ntBASIC2.1□□□□□ -2.07
Ushbp1Q8R370 Gm26864-201ENSMUST00000181346 156 ntBASIC2.1□□□□□ -2.07
Ushbp1Q8R370 Mir6419-201ENSMUST00000184784 113 ntBASIC2.1□□□□□ -2.07
Ushbp1Q8R370 Gm45492-201ENSMUST00000211611 288 ntBASIC2.1□□□□□ -2.07
Ushbp1Q8R370 Gm24461-201ENSMUST00000082735 103 ntBASIC2.1□□□□□ -2.07
Ushbp1Q8R370 Snord61-201ENSMUST00000083176 71 ntBASIC2.1□□□□□ -2.07
Ushbp1Q8R370 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Ushbp1Q8R370 Gm26011-201ENSMUST00000104410 104 ntBASIC2.09□□□□□ -2.07
Ushbp1Q8R370 Gm11644-201ENSMUST00000119735 150 ntBASIC2.09□□□□□ -2.07
Ushbp1Q8R370 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC2.09□□□□□ -2.07
Ushbp1Q8R370 Mir7679-201ENSMUST00000183379 63 ntBASIC2.09□□□□□ -2.07
Ushbp1Q8R370 Gm27544-201ENSMUST00000185069 155 ntBASIC2.09□□□□□ -2.07
Ushbp1Q8R370 Gm44358-201ENSMUST00000196301 98 ntBASIC2.09□□□□□ -2.07
Ushbp1Q8R370 Gm44464-201ENSMUST00000198010 138 ntBASIC2.09□□□□□ -2.07
Ushbp1Q8R370 Gm24616-201ENSMUST00000083274 139 ntBASIC2.09□□□□□ -2.07
Ushbp1Q8R370 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
Ushbp1Q8R370 Gm43484-201ENSMUST00000198333 5966 ntBASIC2.08□□□□□ -2.08
Ushbp1Q8R370 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC2.08□□□□□ -2.08
Ushbp1Q8R370 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
Ushbp1Q8R370 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Ushbp1Q8R370 Gm23172-201ENSMUST00000157160 124 ntBASIC2.08□□□□□ -2.08
Ushbp1Q8R370 Gm24747-201ENSMUST00000157835 87 ntBASIC2.08□□□□□ -2.08
Ushbp1Q8R370 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC2.08□□□□□ -2.08
Ushbp1Q8R370 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC2.08□□□□□ -2.08
Ushbp1Q8R370 Gm25588-201ENSMUST00000082501 140 ntBASIC2.08□□□□□ -2.08
Ushbp1Q8R370 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC2.08□□□□□ -2.08
Ushbp1Q8R370 Gm25090-201ENSMUST00000104000 132 ntBASIC2.07□□□□□ -2.08
Ushbp1Q8R370 Gm24586-201ENSMUST00000116695 89 ntBASIC2.07□□□□□ -2.08
Ushbp1Q8R370 Gm14626-201ENSMUST00000117619 216 ntBASIC2.07□□□□□ -2.08
Ushbp1Q8R370 Gm15067-201ENSMUST00000119534 156 ntBASIC2.07□□□□□ -2.08
Ushbp1Q8R370 Gm14671-201ENSMUST00000121790 262 ntBASIC2.07□□□□□ -2.08
Ushbp1Q8R370 Gm22790-201ENSMUST00000157229 129 ntBASIC2.07□□□□□ -2.08
Ushbp1Q8R370 Gm23044-201ENSMUST00000157891 100 ntBASIC2.07□□□□□ -2.08
Ushbp1Q8R370 Gm24770-201ENSMUST00000158505 92 ntBASIC2.07□□□□□ -2.08
Ushbp1Q8R370 Trav5d-3-201ENSMUST00000170041 270 ntBASIC2.07□□□□□ -2.08
Ushbp1Q8R370 Gm25730-201ENSMUST00000178753 165 ntBASIC2.07□□□□□ -2.08
Ushbp1Q8R370 Gm43381-201ENSMUST00000198553 165 ntBASIC2.07□□□□□ -2.08
Ushbp1Q8R370 Gm23303-201ENSMUST00000082714 152 ntBASIC2.07□□□□□ -2.08
Ushbp1Q8R370 Gm22681-201ENSMUST00000083853 106 ntBASIC2.07□□□□□ -2.08
Ushbp1Q8R370 Gm25832-201ENSMUST00000104140 130 ntBASIC2.06□□□□□ -2.08
Ushbp1Q8R370 Mir1931-201ENSMUST00000158589 119 ntBASIC2.06□□□□□ -2.08
Ushbp1Q8R370 Gm23445-201ENSMUST00000082800 107 ntBASIC2.06□□□□□ -2.08
Ushbp1Q8R370 Gm23138-201ENSMUST00000083365 103 ntBASIC2.06□□□□□ -2.08
Ushbp1Q8R370 Gm25409-201ENSMUST00000083764 131 ntBASIC2.06□□□□□ -2.08
Ushbp1Q8R370 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Ushbp1Q8R370 Gm22673-201ENSMUST00000104415 131 ntBASIC2.05□□□□□ -2.08
Ushbp1Q8R370 Gm14709-201ENSMUST00000121225 304 ntBASIC2.05□□□□□ -2.08
Ushbp1Q8R370 Gm24717-201ENSMUST00000157522 124 ntBASIC2.05□□□□□ -2.08
Ushbp1Q8R370 Gm24656-201ENSMUST00000177548 132 ntBASIC2.05□□□□□ -2.08
Ushbp1Q8R370 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC2.05□□□□□ -2.08
Ushbp1Q8R370 Gm25797-201ENSMUST00000082640 107 ntBASIC2.05□□□□□ -2.08
Ushbp1Q8R370 Mir19b-2-201ENSMUST00000083539 84 ntBASIC2.05□□□□□ -2.08
Ushbp1Q8R370 Gm22828-201ENSMUST00000083768 107 ntBASIC2.05□□□□□ -2.08
Ushbp1Q8R370 Gm25878-201ENSMUST00000104327 93 ntBASIC2.04□□□□□ -2.08
Ushbp1Q8R370 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC2.04□□□□□ -2.08
Ushbp1Q8R370 Gm25060-201ENSMUST00000157374 130 ntBASIC2.04□□□□□ -2.08
Ushbp1Q8R370 Gm25771-201ENSMUST00000158565 144 ntBASIC2.04□□□□□ -2.08
Ushbp1Q8R370 Mir3057-201ENSMUST00000175040 91 ntBASIC2.04□□□□□ -2.08
Ushbp1Q8R370 Mir6995-201ENSMUST00000183658 71 ntBASIC2.04□□□□□ -2.08
Ushbp1Q8R370 Gm43602-201ENSMUST00000196772 300 ntBASIC2.04□□□□□ -2.08
Ushbp1Q8R370 Gm24805-201ENSMUST00000082931 104 ntBASIC2.04□□□□□ -2.08
Ushbp1Q8R370 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Ushbp1Q8R370 Gm14502-201ENSMUST00000118154 113 ntBASIC2.03□□□□□ -2.08
Ushbp1Q8R370 n-R5s188-201ENSMUST00000122646 105 ntBASIC2.03□□□□□ -2.08
Ushbp1Q8R370 Gm15692-201ENSMUST00000152173 352 ntBASIC2.03□□□□□ -2.08
Ushbp1Q8R370 Mir6379-201ENSMUST00000183392 115 ntBASIC2.03□□□□□ -2.08
Ushbp1Q8R370 Mir7021-201ENSMUST00000197026 63 ntBASIC2.03□□□□□ -2.08
Ushbp1Q8R370 Gm43898-201ENSMUST00000204456 424 ntBASIC2.03□□□□□ -2.08
Ushbp1Q8R370 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC2.03□□□□□ -2.08
Ushbp1Q8R370 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
Ushbp1Q8R370 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Ushbp1Q8R370 Gm24984-201ENSMUST00000104454 133 ntBASIC2.02□□□□□ -2.09
Ushbp1Q8R370 Fau-ps1-201ENSMUST00000119675 252 ntBASIC2.02□□□□□ -2.09
Ushbp1Q8R370 Gm27326-201ENSMUST00000183504 95 ntBASIC2.02□□□□□ -2.09
Ushbp1Q8R370 Mir7678-201ENSMUST00000185076 71 ntBASIC2.02□□□□□ -2.09
Ushbp1Q8R370 Gm23100-201ENSMUST00000083455 141 ntBASIC2.02□□□□□ -2.09
Ushbp1Q8R370 Mir221-201ENSMUST00000083488 95 ntBASIC2.02□□□□□ -2.09
Ushbp1Q8R370 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 213.5 ms