Protein–RNA interactions for Protein: P23469

PTPRE, Receptor-type tyrosine-protein phosphatase epsilon, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPREP23469 GSTA9P-201ENST00000406231 611 ntBASIC9.17□□□□□ -0.94
PTPREP23469 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
PTPREP23469 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC9.17□□□□□ -0.94
PTPREP23469 AC007435.1-201ENST00000421086 415 ntBASIC9.17□□□□□ -0.94
PTPREP23469 AC093107.1-201ENST00000422772 609 ntBASIC9.17□□□□□ -0.94
PTPREP23469 CCNB1IP1P1-201ENST00000428976 839 ntBASIC9.17□□□□□ -0.94
PTPREP23469 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
PTPREP23469 ATP5LP4-201ENST00000434169 307 ntBASIC9.17□□□□□ -0.94
PTPREP23469 AC092170.1-201ENST00000440211 356 ntBASIC9.17□□□□□ -0.94
PTPREP23469 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC9.17□□□□□ -0.94
PTPREP23469 SNRPGP6-201ENST00000451124 220 ntBASIC9.17□□□□□ -0.94
PTPREP23469 RPS29P5-201ENST00000452777 171 ntBASIC9.17□□□□□ -0.94
PTPREP23469 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC9.17□□□□□ -0.94
PTPREP23469 AL121877.1-201ENST00000453704 622 ntBASIC9.17□□□□□ -0.94
PTPREP23469 AL157400.2-201ENST00000454174 563 ntTSL 2 BASIC9.17□□□□□ -0.94
PTPREP23469 AC130509.1-201ENST00000464158 433 ntBASIC9.17□□□□□ -0.94
PTPREP23469 AC022336.1-201ENST00000475510 337 ntBASIC9.17□□□□□ -0.94
PTPREP23469 AC018475.1-201ENST00000478358 465 ntBASIC9.17□□□□□ -0.94
PTPREP23469 RPS3AP14-201ENST00000483907 780 ntBASIC9.17□□□□□ -0.94
PTPREP23469 LARP1BP2-201ENST00000486594 519 ntBASIC9.17□□□□□ -0.94
PTPREP23469 AC084871.2-201ENST00000503355 464 ntBASIC9.17□□□□□ -0.94
PTPREP23469 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC9.17□□□□□ -0.94
PTPREP23469 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC9.17□□□□□ -0.94
PTPREP23469 AC104108.1-201ENST00000509930 412 ntBASIC9.17□□□□□ -0.94
PTPREP23469 AC026700.1-201ENST00000512074 544 ntBASIC9.17□□□□□ -0.94
PTPREP23469 AK6-204ENST00000512561 587 ntTSL 5 BASIC9.17□□□□□ -0.94
PTPREP23469 RNA5SP75-201ENST00000516841 111 ntBASIC9.17□□□□□ -0.94
PTPREP23469 NUTF2P2-201ENST00000551207 384 ntBASIC9.17□□□□□ -0.94
PTPREP23469 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC9.17□□□□□ -0.94
PTPREP23469 AC110588.1-201ENST00000559699 137 ntBASIC9.17□□□□□ -0.94
PTPREP23469 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC9.17□□□□□ -0.94
PTPREP23469 AC107954.1-201ENST00000565906 727 ntBASIC9.17□□□□□ -0.94
PTPREP23469 AC005410.2-201ENST00000580270 463 ntTSL 3 BASIC9.17□□□□□ -0.94
PTPREP23469 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC9.17□□□□□ -0.94
PTPREP23469 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC9.17□□□□□ -0.94
PTPREP23469 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC9.17□□□□□ -0.94
PTPREP23469 AL603758.1-201ENST00000618654 241 ntBASIC9.17□□□□□ -0.94
PTPREP23469 AC136475.10-201ENST00000620253 385 ntBASIC9.17□□□□□ -0.94
PTPREP23469 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC9.17□□□□□ -0.94
PTPREP23469 HBG1-202ENST00000632727 369 ntTSL 3 BASIC9.17□□□□□ -0.94
PTPREP23469 AC016582.3-206ENST00000636547 207 ntBASIC9.17□□□□□ -0.94
PTPREP23469 TXNRD1-219ENST00000529546 2018 ntTSL 2 BASIC9.17□□□□□ -0.94
PTPREP23469 ABCB4-203ENST00000359206 3923 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
PTPREP23469 CNOT4-201ENST00000315544 3783 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
PTPREP23469 NEDD4L-209ENST00000456986 8436 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
PTPREP23469 LINC01232-204ENST00000626729 2796 ntTSL 2 BASIC9.17□□□□□ -0.94
PTPREP23469 IGFN1-202ENST00000335211 11810 ntAPPRIS P2 TSL 5 BASIC9.17□□□□□ -0.94
PTPREP23469 AL353795.1-201ENST00000439134 1775 ntBASIC9.17□□□□□ -0.94
PTPREP23469 PSG9-204ENST00000418820 1748 ntTSL 5 BASIC9.17□□□□□ -0.94
PTPREP23469 HMGXB4-201ENST00000216106 4047 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
PTPREP23469 ARHGEF9-234ENST00000637557 4775 ntTSL 5 BASIC9.16□□□□□ -0.94
PTPREP23469 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
PTPREP23469 AOAH-208ENST00000612871 2336 ntAPPRIS ALT2 TSL 2 BASIC9.16□□□□□ -0.94
PTPREP23469 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
PTPREP23469 AC022150.4-201ENST00000598322 2848 ntBASIC9.16□□□□□ -0.94
PTPREP23469 AL390195.2-201ENST00000564771 2023 ntBASIC9.16□□□□□ -0.94
PTPREP23469 KDM5A-201ENST00000399788 10763 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
PTPREP23469 ERGIC1-201ENST00000326654 3952 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
PTPREP23469 ZNF611-204ENST00000543227 4517 ntAPPRIS P1 TSL 4 BASIC9.16□□□□□ -0.94
PTPREP23469 C6orf89-202ENST00000359359 2565 ntTSL 5 BASIC9.16□□□□□ -0.94
PTPREP23469 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
PTPREP23469 Y_RNA.72-201ENST00000362894 103 ntBASIC9.16□□□□□ -0.94
PTPREP23469 Y_RNA.401-201ENST00000383965 117 ntBASIC9.16□□□□□ -0.94
PTPREP23469 RNU6-784P-201ENST00000384330 106 ntBASIC9.16□□□□□ -0.94
PTPREP23469 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
PTPREP23469 CYCSP45-201ENST00000402289 315 ntBASIC9.16□□□□□ -0.94
PTPREP23469 RAB28P1-201ENST00000411517 641 ntBASIC9.16□□□□□ -0.94
PTPREP23469 AC011753.4-201ENST00000417974 311 ntBASIC9.16□□□□□ -0.94
PTPREP23469 PDCL2P1-201ENST00000419302 352 ntBASIC9.16□□□□□ -0.94
PTPREP23469 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC9.16□□□□□ -0.94
PTPREP23469 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC9.16□□□□□ -0.94
PTPREP23469 DEFA9P-201ENST00000433042 285 ntBASIC9.16□□□□□ -0.94
PTPREP23469 AL353803.3-201ENST00000444641 335 ntBASIC9.16□□□□□ -0.94
PTPREP23469 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC9.16□□□□□ -0.94
PTPREP23469 AC007849.1-201ENST00000469794 513 ntTSL 4 BASIC9.16□□□□□ -0.94
PTPREP23469 AL122013.1-201ENST00000473054 801 ntBASIC9.16□□□□□ -0.94
PTPREP23469 RPL39P36-201ENST00000490784 156 ntBASIC9.16□□□□□ -0.94
PTPREP23469 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC9.16□□□□□ -0.94
PTPREP23469 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC9.16□□□□□ -0.94
PTPREP23469 AC025176.1-201ENST00000510261 365 ntTSL 4 BASIC9.16□□□□□ -0.94
PTPREP23469 MTCO1P30-201ENST00000515244 580 ntBASIC9.16□□□□□ -0.94
PTPREP23469 RNU6-1046P-201ENST00000516538 107 ntBASIC9.16□□□□□ -0.94
PTPREP23469 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC9.16□□□□□ -0.94
PTPREP23469 AC026979.2-201ENST00000523733 583 ntTSL 5 BASIC9.16□□□□□ -0.94
PTPREP23469 OPRK1-204ENST00000524278 1195 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
PTPREP23469 HNRNPCP8-201ENST00000528764 888 ntBASIC9.16□□□□□ -0.94
PTPREP23469 OR4C2P-201ENST00000530855 1064 ntBASIC9.16□□□□□ -0.94
PTPREP23469 AC008055.1-201ENST00000547032 609 ntBASIC9.16□□□□□ -0.94
PTPREP23469 AC067735.1-201ENST00000551152 526 ntTSL 2 BASIC9.16□□□□□ -0.94
PTPREP23469 AC037471.2-201ENST00000564941 598 ntBASIC9.16□□□□□ -0.94
PTPREP23469 AC087565.1-201ENST00000565061 391 ntTSL 5 BASIC9.16□□□□□ -0.94
PTPREP23469 AC010653.1-201ENST00000571108 881 ntBASIC9.16□□□□□ -0.94
PTPREP23469 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC9.16□□□□□ -0.94
PTPREP23469 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC9.16□□□□□ -0.94
PTPREP23469 MIR3171-201ENST00000584270 74 ntBASIC9.16□□□□□ -0.94
PTPREP23469 VN1R80P-201ENST00000597126 338 ntBASIC9.16□□□□□ -0.94
PTPREP23469 SUMO2P14-201ENST00000604488 293 ntBASIC9.16□□□□□ -0.94
PTPREP23469 AC099676.1-201ENST00000608886 657 ntBASIC9.16□□□□□ -0.94
PTPREP23469 AL592494.3-201ENST00000609485 464 ntBASIC9.16□□□□□ -0.94
PTPREP23469 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC9.16□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 215 ms