Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
PdfS4R2K0 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
PdfS4R2K0 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PdfS4R2K0 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
PdfS4R2K0 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PdfS4R2K0 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC13.04□□□□□ -0.32
PdfS4R2K0 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PdfS4R2K0 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC13.04□□□□□ -0.32
PdfS4R2K0 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
PdfS4R2K0 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PdfS4R2K0 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC13.04□□□□□ -0.32
PdfS4R2K0 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC13.04□□□□□ -0.32
PdfS4R2K0 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
PdfS4R2K0 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
PdfS4R2K0 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PdfS4R2K0 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
PdfS4R2K0 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
PdfS4R2K0 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PdfS4R2K0 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
PdfS4R2K0 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PdfS4R2K0 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
PdfS4R2K0 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PdfS4R2K0 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
PdfS4R2K0 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PdfS4R2K0 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
PdfS4R2K0 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PdfS4R2K0 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PdfS4R2K0 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PdfS4R2K0 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
PdfS4R2K0 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PdfS4R2K0 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
PdfS4R2K0 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
PdfS4R2K0 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC13.03□□□□□ -0.32
PdfS4R2K0 Gm3807-201ENSMUST00000193520 1168 ntBASIC13.03□□□□□ -0.32
PdfS4R2K0 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
PdfS4R2K0 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PdfS4R2K0 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC13.03□□□□□ -0.32
PdfS4R2K0 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
PdfS4R2K0 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
PdfS4R2K0 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
PdfS4R2K0 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
PdfS4R2K0 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PdfS4R2K0 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PdfS4R2K0 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
PdfS4R2K0 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PdfS4R2K0 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC13.03□□□□□ -0.32
PdfS4R2K0 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC13.03□□□□□ -0.32
PdfS4R2K0 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
PdfS4R2K0 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
PdfS4R2K0 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
PdfS4R2K0 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
PdfS4R2K0 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
PdfS4R2K0 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
PdfS4R2K0 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
PdfS4R2K0 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
PdfS4R2K0 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC13.02□□□□□ -0.33
PdfS4R2K0 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
PdfS4R2K0 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
PdfS4R2K0 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC13.02□□□□□ -0.33
PdfS4R2K0 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
PdfS4R2K0 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
PdfS4R2K0 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
PdfS4R2K0 Gm37563-201ENSMUST00000192580 1513 ntBASIC13.02□□□□□ -0.33
PdfS4R2K0 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
PdfS4R2K0 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
PdfS4R2K0 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
PdfS4R2K0 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
PdfS4R2K0 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
PdfS4R2K0 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
PdfS4R2K0 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PdfS4R2K0 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
PdfS4R2K0 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PdfS4R2K0 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PdfS4R2K0 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
PdfS4R2K0 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
PdfS4R2K0 Gm29257-201ENSMUST00000186115 639 ntBASIC13.01□□□□□ -0.33
PdfS4R2K0 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC13.01□□□□□ -0.33
PdfS4R2K0 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
PdfS4R2K0 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
PdfS4R2K0 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PdfS4R2K0 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PdfS4R2K0 Idnk-204ENSMUST00000226010 1898 ntBASIC13.01□□□□□ -0.33
PdfS4R2K0 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PdfS4R2K0 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PdfS4R2K0 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PdfS4R2K0 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PdfS4R2K0 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
PdfS4R2K0 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PdfS4R2K0 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
PdfS4R2K0 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PdfS4R2K0 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13□□□□□ -0.33
PdfS4R2K0 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PdfS4R2K0 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PdfS4R2K0 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
PdfS4R2K0 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
PdfS4R2K0 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC13□□□□□ -0.33
PdfS4R2K0 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
PdfS4R2K0 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
PdfS4R2K0 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC13□□□□□ -0.33
PdfS4R2K0 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms