Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nubp1Q9R060 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nubp1Q9R060 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nubp1Q9R060 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nubp1Q9R060 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Nubp1Q9R060 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nubp1Q9R060 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nubp1Q9R060 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nubp1Q9R060 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Nubp1Q9R060 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nubp1Q9R060 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC14.81□□□□□ -0.04
Nubp1Q9R060 Gm9194-201ENSMUST00000220749 1447 ntBASIC14.81□□□□□ -0.04
Nubp1Q9R060 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nubp1Q9R060 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nubp1Q9R060 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nubp1Q9R060 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nubp1Q9R060 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nubp1Q9R060 Gm42939-201ENSMUST00000197514 2205 ntBASIC14.81□□□□□ -0.04
Nubp1Q9R060 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nubp1Q9R060 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Nubp1Q9R060 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Nubp1Q9R060 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Nubp1Q9R060 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nubp1Q9R060 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nubp1Q9R060 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC14.8□□□□□ -0.04
Nubp1Q9R060 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nubp1Q9R060 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nubp1Q9R060 Mir770-201ENSMUST00000103252 94 ntBASIC14.8□□□□□ -0.04
Nubp1Q9R060 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.8□□□□□ -0.04
Nubp1Q9R060 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nubp1Q9R060 Gm37722-201ENSMUST00000193757 208 ntBASIC14.8□□□□□ -0.04
Nubp1Q9R060 Gm43347-201ENSMUST00000200226 580 ntBASIC14.8□□□□□ -0.04
Nubp1Q9R060 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Nubp1Q9R060 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nubp1Q9R060 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nubp1Q9R060 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nubp1Q9R060 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nubp1Q9R060 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Nubp1Q9R060 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nubp1Q9R060 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nubp1Q9R060 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nubp1Q9R060 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Nubp1Q9R060 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nubp1Q9R060 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nubp1Q9R060 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nubp1Q9R060 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nubp1Q9R060 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nubp1Q9R060 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nubp1Q9R060 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Nubp1Q9R060 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nubp1Q9R060 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nubp1Q9R060 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nubp1Q9R060 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nubp1Q9R060 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nubp1Q9R060 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nubp1Q9R060 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nubp1Q9R060 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nubp1Q9R060 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nubp1Q9R060 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nubp1Q9R060 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nubp1Q9R060 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nubp1Q9R060 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nubp1Q9R060 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Nubp1Q9R060 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nubp1Q9R060 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.79□□□□□ -0.04
Nubp1Q9R060 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nubp1Q9R060 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
Nubp1Q9R060 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nubp1Q9R060 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nubp1Q9R060 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nubp1Q9R060 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nubp1Q9R060 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nubp1Q9R060 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nubp1Q9R060 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nubp1Q9R060 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.78□□□□□ -0.04
Nubp1Q9R060 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nubp1Q9R060 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nubp1Q9R060 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Nubp1Q9R060 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Nubp1Q9R060 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nubp1Q9R060 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nubp1Q9R060 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nubp1Q9R060 Gm45141-201ENSMUST00000206502 1888 ntBASIC14.78□□□□□ -0.04
Nubp1Q9R060 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nubp1Q9R060 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Nubp1Q9R060 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nubp1Q9R060 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nubp1Q9R060 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nubp1Q9R060 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nubp1Q9R060 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nubp1Q9R060 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nubp1Q9R060 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nubp1Q9R060 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nubp1Q9R060 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nubp1Q9R060 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nubp1Q9R060 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC14.77□□□□□ -0.05
Nubp1Q9R060 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Nubp1Q9R060 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Nubp1Q9R060 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nubp1Q9R060 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms