Protein–RNA interactions for Protein: Q9QZ28

Six6, Homeobox protein SIX6, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six6Q9QZ28 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
Six6Q9QZ28 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Six6Q9QZ28 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
Six6Q9QZ28 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Six6Q9QZ28 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
Six6Q9QZ28 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Six6Q9QZ28 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Six6Q9QZ28 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Six6Q9QZ28 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Six6Q9QZ28 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC14.45□□□□□ -0.1
Six6Q9QZ28 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Six6Q9QZ28 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Six6Q9QZ28 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Six6Q9QZ28 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Six6Q9QZ28 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Six6Q9QZ28 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Six6Q9QZ28 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Six6Q9QZ28 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Six6Q9QZ28 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Six6Q9QZ28 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC14.45□□□□□ -0.1
Six6Q9QZ28 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Six6Q9QZ28 Mir8112-201ENSMUST00000184382 131 ntBASIC14.45□□□□□ -0.1
Six6Q9QZ28 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC14.45□□□□□ -0.1
Six6Q9QZ28 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Six6Q9QZ28 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Six6Q9QZ28 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Six6Q9QZ28 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC14.45□□□□□ -0.1
Six6Q9QZ28 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Six6Q9QZ28 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Six6Q9QZ28 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Six6Q9QZ28 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Six6Q9QZ28 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Six6Q9QZ28 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Six6Q9QZ28 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Six6Q9QZ28 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Six6Q9QZ28 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Six6Q9QZ28 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Six6Q9QZ28 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Six6Q9QZ28 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Six6Q9QZ28 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Six6Q9QZ28 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Six6Q9QZ28 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC14.44□□□□□ -0.1
Six6Q9QZ28 CT010467.1-202ENSMUST00000205406 714 ntBASIC14.44□□□□□ -0.1
Six6Q9QZ28 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Six6Q9QZ28 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Six6Q9QZ28 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Six6Q9QZ28 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.44□□□□□ -0.1
Six6Q9QZ28 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Six6Q9QZ28 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Six6Q9QZ28 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Six6Q9QZ28 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Six6Q9QZ28 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Six6Q9QZ28 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Six6Q9QZ28 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Six6Q9QZ28 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Six6Q9QZ28 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Six6Q9QZ28 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Six6Q9QZ28 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.43□□□□□ -0.1
Six6Q9QZ28 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Six6Q9QZ28 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Six6Q9QZ28 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.43□□□□□ -0.1
Six6Q9QZ28 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Six6Q9QZ28 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Six6Q9QZ28 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Six6Q9QZ28 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Six6Q9QZ28 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Six6Q9QZ28 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Six6Q9QZ28 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Six6Q9QZ28 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC14.43□□□□□ -0.1
Six6Q9QZ28 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Six6Q9QZ28 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Six6Q9QZ28 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Six6Q9QZ28 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC14.43□□□□□ -0.1
Six6Q9QZ28 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Six6Q9QZ28 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC14.43□□□□□ -0.1
Six6Q9QZ28 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Six6Q9QZ28 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Six6Q9QZ28 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Six6Q9QZ28 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC14.43□□□□□ -0.1
Six6Q9QZ28 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Six6Q9QZ28 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.43□□□□□ -0.1
Six6Q9QZ28 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Six6Q9QZ28 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Six6Q9QZ28 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Six6Q9QZ28 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Six6Q9QZ28 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Six6Q9QZ28 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Six6Q9QZ28 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC14.42□□□□□ -0.1
Six6Q9QZ28 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Six6Q9QZ28 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Six6Q9QZ28 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Six6Q9QZ28 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Six6Q9QZ28 Gm12922-201ENSMUST00000120626 809 ntBASIC14.42□□□□□ -0.1
Six6Q9QZ28 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Six6Q9QZ28 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Six6Q9QZ28 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC14.42□□□□□ -0.1
Six6Q9QZ28 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Six6Q9QZ28 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Six6Q9QZ28 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Six6Q9QZ28 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms