Protein–RNA interactions for Protein: Q9QXZ7

Nr2e3, Photoreceptor-specific nuclear receptor, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr2e3Q9QXZ7 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nr2e3Q9QXZ7 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nr2e3Q9QXZ7 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC19.17■□□□□ 0.66
Nr2e3Q9QXZ7 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Nr2e3Q9QXZ7 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nr2e3Q9QXZ7 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC19.17■□□□□ 0.66
Nr2e3Q9QXZ7 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nr2e3Q9QXZ7 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nr2e3Q9QXZ7 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC19.17■□□□□ 0.66
Nr2e3Q9QXZ7 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nr2e3Q9QXZ7 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nr2e3Q9QXZ7 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nr2e3Q9QXZ7 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nr2e3Q9QXZ7 Wnt10b-204ENSMUST00000226655 1807 ntBASIC19.16■□□□□ 0.66
Nr2e3Q9QXZ7 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Nr2e3Q9QXZ7 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nr2e3Q9QXZ7 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nr2e3Q9QXZ7 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nr2e3Q9QXZ7 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC19.16■□□□□ 0.66
Nr2e3Q9QXZ7 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC19.16■□□□□ 0.66
Nr2e3Q9QXZ7 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nr2e3Q9QXZ7 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Nr2e3Q9QXZ7 Gm3272-201ENSMUST00000181181 1229 ntBASIC19.16■□□□□ 0.66
Nr2e3Q9QXZ7 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC19.16■□□□□ 0.66
Nr2e3Q9QXZ7 Gm7213-201ENSMUST00000215977 950 ntBASIC19.16■□□□□ 0.66
Nr2e3Q9QXZ7 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nr2e3Q9QXZ7 Gm10566-201ENSMUST00000086739 996 ntBASIC19.16■□□□□ 0.66
Nr2e3Q9QXZ7 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nr2e3Q9QXZ7 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.16■□□□□ 0.66
Nr2e3Q9QXZ7 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Nr2e3Q9QXZ7 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nr2e3Q9QXZ7 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Nr2e3Q9QXZ7 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nr2e3Q9QXZ7 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Nr2e3Q9QXZ7 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nr2e3Q9QXZ7 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nr2e3Q9QXZ7 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nr2e3Q9QXZ7 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
Nr2e3Q9QXZ7 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nr2e3Q9QXZ7 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nr2e3Q9QXZ7 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nr2e3Q9QXZ7 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Nr2e3Q9QXZ7 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nr2e3Q9QXZ7 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nr2e3Q9QXZ7 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nr2e3Q9QXZ7 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nr2e3Q9QXZ7 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nr2e3Q9QXZ7 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nr2e3Q9QXZ7 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC19.14■□□□□ 0.66
Nr2e3Q9QXZ7 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
Nr2e3Q9QXZ7 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Nr2e3Q9QXZ7 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
Nr2e3Q9QXZ7 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nr2e3Q9QXZ7 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Nr2e3Q9QXZ7 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nr2e3Q9QXZ7 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.14■□□□□ 0.65
Nr2e3Q9QXZ7 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nr2e3Q9QXZ7 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC19.14■□□□□ 0.65
Nr2e3Q9QXZ7 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nr2e3Q9QXZ7 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nr2e3Q9QXZ7 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Nr2e3Q9QXZ7 Actl10-202ENSMUST00000226583 1501 ntBASIC19.14■□□□□ 0.65
Nr2e3Q9QXZ7 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nr2e3Q9QXZ7 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nr2e3Q9QXZ7 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Nr2e3Q9QXZ7 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Nr2e3Q9QXZ7 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nr2e3Q9QXZ7 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nr2e3Q9QXZ7 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Nr2e3Q9QXZ7 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nr2e3Q9QXZ7 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nr2e3Q9QXZ7 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nr2e3Q9QXZ7 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Nr2e3Q9QXZ7 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nr2e3Q9QXZ7 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Nr2e3Q9QXZ7 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nr2e3Q9QXZ7 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nr2e3Q9QXZ7 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nr2e3Q9QXZ7 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC19.12■□□□□ 0.65
Nr2e3Q9QXZ7 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Nr2e3Q9QXZ7 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC19.12■□□□□ 0.65
Nr2e3Q9QXZ7 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.12■□□□□ 0.65
Nr2e3Q9QXZ7 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nr2e3Q9QXZ7 Gm18032-201ENSMUST00000222541 538 ntBASIC19.12■□□□□ 0.65
Nr2e3Q9QXZ7 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nr2e3Q9QXZ7 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Nr2e3Q9QXZ7 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Nr2e3Q9QXZ7 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nr2e3Q9QXZ7 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nr2e3Q9QXZ7 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nr2e3Q9QXZ7 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nr2e3Q9QXZ7 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nr2e3Q9QXZ7 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Nr2e3Q9QXZ7 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nr2e3Q9QXZ7 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nr2e3Q9QXZ7 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nr2e3Q9QXZ7 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nr2e3Q9QXZ7 Gm13836-201ENSMUST00000121159 501 ntBASIC19.11■□□□□ 0.65
Nr2e3Q9QXZ7 Mir1668-201ENSMUST00000184114 107 ntBASIC19.11■□□□□ 0.65
Nr2e3Q9QXZ7 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms