Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sec61a2Q9JLR1 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sec61a2Q9JLR1 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sec61a2Q9JLR1 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sec61a2Q9JLR1 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sec61a2Q9JLR1 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sec61a2Q9JLR1 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Sec61a2Q9JLR1 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sec61a2Q9JLR1 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sec61a2Q9JLR1 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sec61a2Q9JLR1 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sec61a2Q9JLR1 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sec61a2Q9JLR1 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sec61a2Q9JLR1 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sec61a2Q9JLR1 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sec61a2Q9JLR1 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Sec61a2Q9JLR1 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sec61a2Q9JLR1 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sec61a2Q9JLR1 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sec61a2Q9JLR1 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sec61a2Q9JLR1 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sec61a2Q9JLR1 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sec61a2Q9JLR1 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sec61a2Q9JLR1 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sec61a2Q9JLR1 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC15.28■□□□□ 0.04
Sec61a2Q9JLR1 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.28■□□□□ 0.04
Sec61a2Q9JLR1 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Sec61a2Q9JLR1 Gm43338-201ENSMUST00000198617 2223 ntBASIC15.28■□□□□ 0.04
Sec61a2Q9JLR1 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
Sec61a2Q9JLR1 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Sec61a2Q9JLR1 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sec61a2Q9JLR1 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sec61a2Q9JLR1 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sec61a2Q9JLR1 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sec61a2Q9JLR1 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sec61a2Q9JLR1 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sec61a2Q9JLR1 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sec61a2Q9JLR1 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sec61a2Q9JLR1 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
Sec61a2Q9JLR1 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sec61a2Q9JLR1 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sec61a2Q9JLR1 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sec61a2Q9JLR1 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sec61a2Q9JLR1 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sec61a2Q9JLR1 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sec61a2Q9JLR1 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sec61a2Q9JLR1 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC15.27■□□□□ 0.04
Sec61a2Q9JLR1 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sec61a2Q9JLR1 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sec61a2Q9JLR1 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sec61a2Q9JLR1 Gm9694-201ENSMUST00000193347 1189 ntBASIC15.27■□□□□ 0.04
Sec61a2Q9JLR1 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC15.27■□□□□ 0.04
Sec61a2Q9JLR1 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
Sec61a2Q9JLR1 Gm4974-201ENSMUST00000209974 875 ntBASIC15.27■□□□□ 0.04
Sec61a2Q9JLR1 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.04
Sec61a2Q9JLR1 AC175538.1-201ENSMUST00000225343 1269 ntBASIC15.27■□□□□ 0.04
Sec61a2Q9JLR1 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sec61a2Q9JLR1 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sec61a2Q9JLR1 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sec61a2Q9JLR1 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Sec61a2Q9JLR1 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.27■□□□□ 0.03
Sec61a2Q9JLR1 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sec61a2Q9JLR1 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC15.27■□□□□ 0.03
Sec61a2Q9JLR1 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sec61a2Q9JLR1 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Sec61a2Q9JLR1 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sec61a2Q9JLR1 AC124581.1-201ENSMUST00000225416 1399 ntBASIC15.26■□□□□ 0.03
Sec61a2Q9JLR1 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sec61a2Q9JLR1 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC15.26■□□□□ 0.03
Sec61a2Q9JLR1 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sec61a2Q9JLR1 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sec61a2Q9JLR1 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sec61a2Q9JLR1 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Sec61a2Q9JLR1 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC15.26■□□□□ 0.03
Sec61a2Q9JLR1 Gm10517-202ENSMUST00000192970 758 ntBASIC15.26■□□□□ 0.03
Sec61a2Q9JLR1 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sec61a2Q9JLR1 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC15.26■□□□□ 0.03
Sec61a2Q9JLR1 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sec61a2Q9JLR1 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sec61a2Q9JLR1 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.26■□□□□ 0.03
Sec61a2Q9JLR1 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sec61a2Q9JLR1 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sec61a2Q9JLR1 Gm19721-201ENSMUST00000195284 1764 ntBASIC15.26■□□□□ 0.03
Sec61a2Q9JLR1 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sec61a2Q9JLR1 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Sec61a2Q9JLR1 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sec61a2Q9JLR1 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sec61a2Q9JLR1 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sec61a2Q9JLR1 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sec61a2Q9JLR1 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Sec61a2Q9JLR1 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sec61a2Q9JLR1 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sec61a2Q9JLR1 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sec61a2Q9JLR1 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Sec61a2Q9JLR1 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sec61a2Q9JLR1 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sec61a2Q9JLR1 Gm715-201ENSMUST00000117865 831 ntBASIC15.25■□□□□ 0.03
Sec61a2Q9JLR1 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC15.25■□□□□ 0.03
Sec61a2Q9JLR1 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC15.25■□□□□ 0.03
Sec61a2Q9JLR1 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms