Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn5aQ9JJV9 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn5aQ9JJV9 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn5aQ9JJV9 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn5aQ9JJV9 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn5aQ9JJV9 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn5aQ9JJV9 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn5aQ9JJV9 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn5aQ9JJV9 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn5aQ9JJV9 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn5aQ9JJV9 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn5aQ9JJV9 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC17.48■□□□□ 0.39
Scn5aQ9JJV9 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.48■□□□□ 0.39
Scn5aQ9JJV9 Gm29707-201ENSMUST00000196325 491 ntBASIC17.48■□□□□ 0.39
Scn5aQ9JJV9 AC132104.2-201ENSMUST00000215011 266 ntBASIC17.48■□□□□ 0.39
Scn5aQ9JJV9 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Scn5aQ9JJV9 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Scn5aQ9JJV9 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn5aQ9JJV9 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn5aQ9JJV9 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Scn5aQ9JJV9 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn5aQ9JJV9 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scn5aQ9JJV9 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scn5aQ9JJV9 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Scn5aQ9JJV9 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scn5aQ9JJV9 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scn5aQ9JJV9 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Scn5aQ9JJV9 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC17.47■□□□□ 0.39
Scn5aQ9JJV9 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
Scn5aQ9JJV9 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Scn5aQ9JJV9 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scn5aQ9JJV9 Gm18195-201ENSMUST00000207604 706 ntBASIC17.47■□□□□ 0.39
Scn5aQ9JJV9 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.47■□□□□ 0.39
Scn5aQ9JJV9 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scn5aQ9JJV9 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.47■□□□□ 0.39
Scn5aQ9JJV9 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
Scn5aQ9JJV9 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scn5aQ9JJV9 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scn5aQ9JJV9 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Scn5aQ9JJV9 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Scn5aQ9JJV9 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scn5aQ9JJV9 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scn5aQ9JJV9 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scn5aQ9JJV9 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scn5aQ9JJV9 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scn5aQ9JJV9 Gm9449-201ENSMUST00000207265 1011 ntBASIC17.47■□□□□ 0.39
Scn5aQ9JJV9 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.47■□□□□ 0.39
Scn5aQ9JJV9 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.47■□□□□ 0.39
Scn5aQ9JJV9 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scn5aQ9JJV9 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Scn5aQ9JJV9 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Scn5aQ9JJV9 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.46■□□□□ 0.39
Scn5aQ9JJV9 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scn5aQ9JJV9 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scn5aQ9JJV9 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scn5aQ9JJV9 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Scn5aQ9JJV9 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scn5aQ9JJV9 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Scn5aQ9JJV9 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC17.46■□□□□ 0.39
Scn5aQ9JJV9 Gm44430-201ENSMUST00000203376 995 ntBASIC17.46■□□□□ 0.39
Scn5aQ9JJV9 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
Scn5aQ9JJV9 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scn5aQ9JJV9 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scn5aQ9JJV9 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scn5aQ9JJV9 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scn5aQ9JJV9 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scn5aQ9JJV9 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scn5aQ9JJV9 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scn5aQ9JJV9 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scn5aQ9JJV9 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Scn5aQ9JJV9 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scn5aQ9JJV9 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scn5aQ9JJV9 Gm25925-201ENSMUST00000158314 306 ntBASIC17.45■□□□□ 0.38
Scn5aQ9JJV9 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Scn5aQ9JJV9 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scn5aQ9JJV9 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scn5aQ9JJV9 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scn5aQ9JJV9 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scn5aQ9JJV9 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scn5aQ9JJV9 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Scn5aQ9JJV9 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Scn5aQ9JJV9 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Scn5aQ9JJV9 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Scn5aQ9JJV9 Gm6376-201ENSMUST00000209407 580 ntBASIC17.45■□□□□ 0.38
Scn5aQ9JJV9 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scn5aQ9JJV9 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.45■□□□□ 0.38
Scn5aQ9JJV9 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scn5aQ9JJV9 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scn5aQ9JJV9 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Scn5aQ9JJV9 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Scn5aQ9JJV9 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scn5aQ9JJV9 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Scn5aQ9JJV9 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Scn5aQ9JJV9 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scn5aQ9JJV9 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scn5aQ9JJV9 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Scn5aQ9JJV9 Mir5131-201ENSMUST00000175426 93 ntBASIC17.44■□□□□ 0.38
Scn5aQ9JJV9 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Scn5aQ9JJV9 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC17.44■□□□□ 0.38
Scn5aQ9JJV9 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms